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Bressan, R. A., Park, H. C., Orsini, F., Oh, D. -ha, Dassanayake, M., Inan, G., et al. (2013). Biotechnology for mechanisms that counteract salt stress in extremophile species: a genome-based view. Plant Biotechnol. Rep., 7(1), 27–37.
Abstract: Molecular genetics has confirmed older research and generated new insights into the ways how plants deal with adverse conditions. This body of research is now being used to interpret stress behavior of plants in new ways, and to add results from most recent genomics-based studies. The new knowledge now includes genome sequences of species that show extreme abiotic stress tolerances, which enables new strategies for applications through either molecular breeding or transgenic engineering. We will highlight some physiological features of the extremophile lifestyle, outline emerging features about halophytism based on genomics, and discuss conclusions about underlying mechanisms.
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Leogrande, R., Lopedota, O., Montemurro, F., Vitti, C., & Ventrella, D. (2012). Effects of irrigation regime and salinity on soil characteristics and yield of tomato. Ital. J. Agron., 7(1), 8.
Abstract: A field experiment was conducted in Mediterranean conditions to evaluate the effects of different irrigation volumes and water quality on yield performance of tomato crop. The tomato crop was irrigated reestablishing 50 (I1), 75 (I2) and 100% (I3) of the crop evapotranspiration (ETc) with two water quality: fresh water with EC 0.9 dS m-1 (FW) and saline water with EC 6 dSm-1 (SW). At harvest, total and marketable yield, weight, number, total soluble solids (TSS) and dry matter of fruit were calculated, The results showed no statistical differences among the three different irrigation volumes on tomato yield and quality. The salinity treatment did not affect yield, probably because the soil salinity in the root zone on average remained below the threshold of tomato salt tolerance. Instead, salinity improved fruit quality parameters as dry matter and TSS by 13 and 8%, respectively. After the first field application of saline water, soil saturated extract cations (SSEC), electrical conductivity of soil paste extract (ECe), sodium absorption ratio (SAR) and exchangeable sodium percentage (ESP) cations increased; the largest increase of cations, in particular of Na, occurred in the top layer. At the end of the experiment, the absolute value of SSEC, ECe and SAR, for all the effects studied, were lower than those recorded in 2007. This behavior was suitable to the reduced volumes of treatments administered in 2009 in respect to the 2007. Furthermore, the higher total rainfall recorded in 2009 increased the leaching and downward movement of salts out of the sampling depth.
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Wallach, D., Mearns, L. O., Ruane, A. C., Rötter, R. P., & Asseng, S. (2016). Lessons from climate modeling on the design and use of ensembles for crop modeling. Clim. Change, 139(3-4), 551–564.
Abstract: Working with ensembles of crop models is a recent but important development in crop modeling which promises to lead to better uncertainty estimates for model projections and predictions, better predictions using the ensemble mean or median, and closer collaboration within the modeling community. There are numerous open questions about the best way to create and analyze such ensembles. Much can be learned from the field of climate modeling, given its much longer experience with ensembles. We draw on that experience to identify questions and make propositions that should help make ensemble modeling with crop models more rigorous and informative. The propositions include defining criteria for acceptance of models in a crop MME, exploring criteria for evaluating the degree of relatedness of models in a MME, studying the effect of number of models in the ensemble, development of a statistical model of model sampling, creation of a repository for MME results, studies of possible differential weighting of models in an ensemble, creation of single model ensembles based on sampling from the uncertainty distribution of parameter values or inputs specifically oriented toward uncertainty estimation, the creation of super ensembles that sample more than one source of uncertainty, the analysis of super ensemble results to obtain information on total uncertainty and the separate contributions of different sources of uncertainty and finally further investigation of the use of the multi-model mean or median as a predictor.
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Tao, F., Roetter, R. P., Palosuo, T., Diaz-Ambrona, C. G. H., Ines Minguez, M., Semenov, M. A., et al. (2017). Designing future barley ideotypes using a crop model ensemble. Europ. J. Agron., 82, 144–162.
Abstract: Climate change and its associated higher frequency and severity of adverse weather events require genotypic adaptation. Process-based ecophysiological modelling offers a powerful means to better target and accelerate development of new crop cultivars. Barley (Hordeum vulgare L) is an important crop throughout the world, and a good model for study of the genetics of stress adaptation because many quantitative trait loci and candidate genes for biotic and abiotic stress tolerance have been identified in it. Here, we developed a new approach to design future crop ideotypes using an ensemble of eight barley simulation models (i.e. APSIM, CropSyst, HERMES, MCWLA, MONICA, SIMPLACE, Sirius Quality, and WOFOST), and applied it to design climate-resilient barley ideotypes for Boreal and Mediterranean climatic zones in Europe. The results showed that specific barley genotypes, represented by sets of cultivar parameters in the crop models, could be promising under future climate change conditions, resulting in increased yields and low inter-annual yield variability. In contrast, other genotypes could result in substantial yield declines. The most favorable climate-zone-specific barley ideotypes were further proposed, having combinations of several key genetic traits in terms of phenology, leaf growth, photosynthesis, drought tolerance, and grain formation. For both Boreal and Mediterranean climatic zones, barley ideotypes under future climatic conditions should have a longer reproductive growing period, lower leaf senescence rate, larger radiation use efficiency or maximum assimilation rate, and higher drought tolerance. Such characteristics can produce substantial positive impacts on yields under contrasting conditions. Moreover, barley ideotypes should have a low photoperiod and high vernalization sensitivity for the Boreal climatic zone; for the Mediterranean, in contrast, it should have a low photoperiod and low vernalization sensitivity. The drought-tolerance trait is more beneficial for the Mediterranean than for the Boreal climatic zone. Our study demonstrates a sound approach to design future barley ideotypes based on an ensemble of well-tested, diverse crop models and on integration of knowledge from multiple disciplines. The robustness of model-aided ideotypes design can be further enhanced by continuously improving crop models and enhancing information exchange between modellers, agro-meteorologists, geneticists, physiologists, and plant breeders. (C) 2016 Elsevier B.V. All rights reserved.
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Yang, H., Dobbie, S., Ramirez-Villegas, J., Feng, K., Challinor, A. J., Chen, B., et al. (2016). Potential negative consequences of geoengineering on crop production: A study of Indian groundnut. Geophys. Res. Let., 43(22), 11786–11795.
Abstract: Geoengineering has been proposed to stabilize global temperature, but its impacts on crop production and stability are not fully understood. A few case studies suggest that certain crops are likely to benefit from solar dimming geoengineering, yet we show that geoengineering is projected to have detrimental effects for groundnut. Using an ensemble of crop-climate model simulations, we illustrate that groundnut yields in India undergo a statistically significant decrease of up to 20% as a result of solar dimming geoengineering relative to RCP4.5. It is somewhat reassuring, however, to find that after a sustained period of 50 years of geoengineering crop yields return to the nongeoengineered values within a few years once the intervention is ceased.
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