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Mansouri, M., & Destain, M. - F. (2015). Predicting biomass and grain protein content using Bayesian methods. Stoch. Environ. Res. Risk Assess., 29(4), 1167–1177.
Abstract: This paper deals with the problem of predicting biomass and grain protein content using improved particle filtering (IPF) based on minimizing the Kullback-Leibler divergence. The performances of IPF are compared with those of the conventional particle filtering (PF) in two comparative studies. In the first one, we apply IPF and PF at a simple dynamic crop model with the aim to predict a single state variable, namely the winter wheat biomass, and to estimate several model parameters. In the second study, the proposed IPF and the PF are applied to a complex crop model (AZODYN) to predict a winter-wheat quality criterion, namely the grain protein content. The results of both comparative studies reveal that the IPF method provides a better estimation accuracy than the PF method. The benefit of the IPF method lies in its ability to provide accuracy related advantages over the PF method since, unlike the PF which depends on the choice of the sampling distribution used to estimate the posterior distribution, the IPF yields an optimum choice of this sampling distribution, which also utilizes the observed data. The performance of the proposed method is evaluated in terms of estimation accuracy, root mean square error, mean absolute error and execution times.
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Kollas, C., Kersebaum, K. C., Nendel, C., Manevski, K., Müller, C., Palosuo, T., et al. (2015). Crop rotation modelling—A European model intercomparison. European Journal of Agronomy, 70, 98–111.
Abstract: • First model inter-comparison on crop rotations. • Continuous simulation of multi-year crop rotations yields outperformed single-year simulation. • Low accuracy of yield predictions in less commonly modelled crops such as potato, radish, grass vegetation. • Multi-model mean prediction was found to minimise the likely error arising from single-model predictions. • The representation of intermediate crops and carry-over effects in the models require further research efforts.
Diversification of crop rotations is considered an option to increase the resilience of European crop production under climate change. So far, however, many crop simulation studies have focused on predicting single crops in separate one-year simulations. Here, we compared the capability of fifteen crop growth simulation models to predict yields in crop rotations at five sites across Europe under minimal calibration. Crop rotations encompassed 301 seasons of ten crop types common to European agriculture and a diverse set of treatments (irrigation, fertilisation, CO2 concentration, soil types, tillage, residues, intermediate or catch crops). We found that the continuous simulation of multi-year crop rotations yielded results of slightly higher quality compared to the simulation of single years and single crops. Intermediate crops (oilseed radish and grass vegetation) were simulated less accurately than main crops (cereals). The majority of models performed better for the treatments of increased CO2 and nitrogen fertilisation than for irrigation and soil-related treatments. The yield simulation of the multi-model ensemble reduced the error compared to single-model simulations. The low degree of superiority of continuous simulations over single year simulation was caused by (a) insufficiently parameterised crops, which affect the performance of the following crop, and (b) the lack of growth-limiting water and/or nitrogen in the crop rotations under investigation. In order to achieve a sound representation of crop rotations, further research is required to synthesise existing knowledge of the physiology of intermediate crops and of carry-over effects from the preceding to the following crop, and to implement/improve the modelling of processes that condition these effects.
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Porter, J. R., Dyball, R., Dumaresq, D., Deutsch, L., & Matsuda, H. (2014). Feeding capitals: Urban food security and self-provisioning in Canberra, Copenhagen and Tokyo. Global Food Security, 3(1), 1–7.
Abstract: Most people live in cities, but most food system studies and food security issues focus on the rural poor. Urban populations differ from rural populations in their food consumption by being generally wealthier, requiring food trade for their food security, defined as the extent to which people have adequate diets. Cities rarely have the self-provisioning capacity to satisfy their own food supply, understood as the extent to which the food consumed by the city’s population is produced from the city’s local agro-ecosystems. Almost inevitably, a city’s food security is augmented by production from remote landscapes, both internal and external in terms of a state’s jurisdiction. We reveal the internal and external food flows necessary for the food security of three wealthy capital cities (Canberra, Australia; Copenhagen, Denmark; Tokyo, Japan). These cities cover two orders of magnitude in population size and three orders of magnitude in population density. From traded volumes of food and their sources into the cities, we calculate the productivity of the city’s regional and non-regional ecosystems that provide food for these cities and estimate the overall utilised land area. The three cities exhibit differing degrees of food self provisioning capacity and exhibit large differences in the areas on which they depend to provide their food. We show that, since 1965, global land area effectively imported to produce food for these cities has increased with their expanding populations, with large reductions in the percentage of demand met by local agro-ecosystems. The physical trading of food commodities embodies ecosystem services, such as water, soil fertility and pollination that are required for land-based food production. This means that the trade in these embodied ecosystem services has become as important for food security as traditional economic mechanisms such as market access and trade. A future policy question, raised by our study, is the degree to which governments will remain committed to open food trade policies in the face of national political unrest caused by food shortages. Our study demonstrates the need to determine the food security and self-provisioning capacity of a wide range of rich and poor cities, taking into account the global location of the ecosystems that are provisioning them. (C) 2013 Elsevier B.V. All rights reserved.
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Persson, T., Höglind, M., Gustavsson, A. - M., Halling, M., Jauhiainen, L., Niemeläinen, O., et al. (2014). Evaluation of the LINGRA timothy model under Nordic conditions. Field Crops Research, 161, 87–97.
Abstract: Simulation models are frequently applied to determine the production potential of forage grasses under various scenarios, including climate change. Thorough calibrations and evaluations of forage grass models can help improve their applicability. This study evaluated the ability of the Light Interception and Utilization Simulator-GRAss (LINGRA) model to predict biomass yield of timothy (Phleum pratense L. cv. Grindstad) in the Nordic countries. Variety trial data for the first and second year after establishment were obtained for seven locations: Jokioinen, Finland (60 degrees 48 ‘ N; 23 degrees 29 ‘ E), Maaninka, Finland (63 degrees 09 ‘ N; 27 degrees 18 ‘ E), Korpa, Iceland (64 degrees 09 ‘ N; 21 degrees 45 ‘ W), Srheim, Norway (58 degrees 41 ‘ N; 5 degrees 39 ‘ E), Lillerud, Sweden (59 degrees 24’ N; 13 degrees 16 ‘ E), Ostersund, Sweden (63 degrees 15 ‘ N; 14 degrees 34 ‘ E) and Ulna Sweden (63 degrees 49 ‘ N; 20 degrees 13 ‘ E) from 1992 to 2012. Two calibrations of the LINGRA model were carried out using Bayesian techniques. In the first of these (SRrheim calibration), data on biomass yield and underlying variables obtained from independent field trials at Srheim were used. In the second (Nordic calibration), biomass data from the other locations were used as well. The model was validated against the remaining set of biomass yields from all locations not included in the Nordic calibration. The observed total seasonal yield the first and second year after establishment was 913 and 991 g DM m(-2) respectively on average across the locations. The corresponding average simulated yield after the Srheim calibration was 1044 (root mean square error (RMSE) 258) and 1112 g DM m(-2) (RMSE 312), respectively. After the Nordic calibration, the simulated average total seasonal yield was 863 (RMSE 242) the first year and 927 g DM m(-2) (RMSE 271) the second year after establishment. The differences between the observed and simulated first cut yield followed the same patterns, whereas the prediction accuracy for second cut yield did not differ substantially between the calibration approaches.Using the parameter set from the Nordic region decreased the model predictability at Srheim compared with only using model parameters derived from this location. These results show that using biomass data from several locations, instead of only one specific location, in the calibration of the LINGRA model improved the overall prediction accuracy of first cut dry matter yield and total seasonal dry matter yield across an environmentally heterogeneous region. To further analyse the usefulness of including multi-site data in forage grass model calibrations, other forage grass models could be evaluated against the same dataset.
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Patil, R. H., Laegdsmand, M., Olesen, J. E., & Porter, J. R. (2014). Soil temperature manipulation to study global warming effects in arable land: performance of buried heating-cable method. Environment and Ecology Research, 1(4), 196–204.
Abstract: Buried heating-cable method for manipulating soil temperature was designed and tested its performance in large concrete lysimeters grown with the wheat crop in Denmark. Soil temperature in heated plots was elevated by 5℃ compared with that in control by burying heating-cable at 0.1 m depth in a plough layer. Temperature sensors were placed at 0.05, 0.1 and 0.25 m depths in soil, and 0.1 m above the soil surface in all plots, which were connected to an automated data logger. Soil-warming setup was able to maintain a mean seasonal temperature difference of 5.0 ± 0.005℃ between heated and control plots at 0.1 m depth while the mean seasonal rise in soil temperature in the top 0.25 m depth (plough layer) was 3℃. Soil temperature in control plots froze (≤ 0℃) for 15 and 13 days respectively at 0.05 and 0.1 m depths while it did not in heated plots during the coldest period (Nov-Apr). This study clearly showed the efficacy of buried heating-cable technique in simulating soil temperature, and thus offers a simple, effective and alternative technique to study soil biogeochemical processes under warmer climates. This technique, however, decouples below-ground soil responses from that of above-ground vegetation response as this method heats only the soil. Therefore, using infrared heaters seems to represent natural climate warming (both air and soil) much more closely and may be used for future climate manipulation field studies.
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