| Records |
| Author |
Wallach, D.; Thorburn, P.; Asseng, S.; Challinor, A.J.; Ewert, F.; Jones, J.W.; Rötter, R.; Ruane, A. |
| Title |
Overview paper on comprehensive framework for assessment of error and uncertainty in crop model predictions |
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Report |
| Year |
2016 |
Publication  |
FACCE MACSUR Reports |
Abbreviated Journal |
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8 |
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Pages |
C4.1-D |
| Keywords |
MACSUR_ACK; CropM |
| Abstract |
Crop models are important tools for impact assessment of climate change, as well as for exploring management options under current climate. It is essential to evaluate the uncertainty associated with predictions of these models. Several ways of quantifying prediction uncertainty have been explored in the literature, but there have been no studies of how the different approaches are related to one another, and how they are related to some overall measure of prediction uncertainty. Here we show that all the different approaches can be related to two different viewpoints about the model; either the model is treated as a fixed predictor with some average error, or the model can be treated as a random variable with uncertainty in one or more of model structure, model inputs and model parameters. We discuss the differences, and show how mean squared error of prediction can be estimated in both cases. The results can be used to put uncertainty estimates into a more general framework and to relate different uncertainty estimates to one another and to overall prediction uncertainty. This should lead to a better understanding of crop model prediction uncertainty and the underlying causes of that uncertainty. This study was published as (Wallach et al. 2016) |
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MA @ office @ |
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2954 |
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Calanca, P. |
| Title |
Modelling the impacts of seasonal drought on herbage growth under climate change |
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Report |
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2016 |
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FACCE MACSUR Reports |
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8 |
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Pages |
SP8-3 |
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LiveM2016: International livestock modelling conference – Modelling grassland-livestock systems under climate change |
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no |
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MA @ admin @ |
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4837 |
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Biewald, A. |
| Title |
Representative Agricultural Pathways for Europe |
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Report |
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2016 |
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FACCE MACSUR Reports |
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9 C6 - |
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Sp9-1 |
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Agricultural aspects have been covered in the scenario process on shared socio-economic pathways (SSPs), but only to a limited extent. In order to analyze the future dynamics of agricultural development they need to be complemented and specified by Representative Agricultural Pathways (RAPs), which cover different aspects of agricultural development as for example European agricultural and domestic policy, environmental policies, different livestock management systems, cropping systems or irrigation efficiencies.In this paper we will develop a general framework for RAPs where we define for each SSP the corresponding specific agricultural development. Some aspects of the above mentioned specifics can be derived from the definitions in the SSPs, as for example irrigation efficiencies which are linked to technological development. Agricultural policies on the other hand are not included in the SSP definitions. Here we will define agricultural and environmental policies, including the available funding in each area of the common agricultural policy (CAP) (pillars 1 and 2). As RAPs can only to a small degree be developed as European guidelines and implemented unilaterally, it is important to translate the overall storylines into specific scenario parameterization at national levels. Concerned by this are 1. national policies, as well as the agri-environmental schemes of the CAP in Pillar II, 2. livestock efficiencies and the development of extensive and intensive farm management, and 3. crop management systems.Additionally we will define which respresentative concentration pathways (RCPs) will match best the future agricultural and agro-economic trajectories. The following 5 preliminary RAPs for Europe will be further developed in our analysis:EU-RAP1 (Sustainable Europe) : strong CAP, strong shift on environmental regulation, no producer support, green CAP with strong mititgation componentEU-RAP2 (Middle of the road): BAU or things will stay as they are.EU-RAP3 (Fragmented Europe): Europe breaks up, rich countries support farmers with national subsidies, poor countries do not. There is no CAP anymoreEU-RAP4 (Two Europes): Europe is divided in a poor and a rich part. In the rich part a green and environmental friendly CAP will be implemented, in the poor part of Europe, the CAP will cease to existEU-RAP5(Fossil fueled Europe): free market world, strong institutions, weak on enviromental regulations, low domestic polices? Local green CAP without mitigation |
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MA @ admin @ |
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4836 |
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Savary, S.; Jouanin, C.; Félix, I.; Gourdain, E.; Piraux, F.; Brun, F.; Willocquet, L. |
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Assessing plant health in a network of experiments on hardy winter wheat varieties in France: patterns of disease-climate associations |
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Journal Article |
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2016 |
Publication |
European Journal of Plant Pathology |
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Eur. J. Plant Pathol. |
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146 |
Issue |
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Pages |
741-755 |
| Keywords |
Puccinia triticina; Puccinia striiformis; Fusarium graminearum; Fusarium culmorum; Fusarium avenaceum; Blumeria graminis; Zymoseptoria tritici; Categorical data; Risk factor; Multiple pathosystem; Correspondence analysis; Logistic regression |
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A data set generated by a multi-year (2003–2010) and multi-site network of experiments on winter wheat varieties grown at different levels of crop management is analysed in order to assess the importance of climate on the variability of wheat health. Wheat health is represented by the multiple pathosystem involving five components: leaf rust, yellow rust, fusarium head blight, powdery mildew, and septoria tritici blotch. An overall framework of associations between multiple diseases and climate variables is developed. This framework involves disease levels in a binary form (i.e. epidemic vs. non-epidemic) and synthesis variables accounting for climate over spring and early summer. The multiple disease-climate pattern of associations of this framework conforms to disease-specific knowledge of climate effects on the components of the pathosystem. It also concurs with a (climate-based) risk factor approach to wheat diseases. This report emphasizes the value of large scale data in crop health assessment and the usefulness of a risk factor approach for both tactical and strategic decisions for crop health management. |
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0929-1873 1573-8469 |
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CropM |
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CropMwp;wos; ftnot_macsur; |
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no |
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MA @ admin @ |
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4755 |
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Stefańczyk, E.; Sobkowiak, S.; Brylińska, M.; Śliwka, J. |
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Diversity of Fusarium spp. associated with dry rot of potato tubers in Poland |
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Journal Article |
| Year |
2016 |
Publication |
European Journal of Plant Pathology |
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Eur. J. Plant Pathol. |
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ITS; mycotoxin; pathogenicity; Solanum tuberosum; tef-1α; β-tubulin; sequence data; Trichothecenes; identification; fungus; pathogenicity; temperature; sensitivity; zearalenone; strains; disease |
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Fusarium spp. belong to the division Ascomycota and cause important plant diseases; these fungi may contaminate food products with mycotoxins, endangering human and animal health. Several Fusarium spp. have been associated with potato dry rot. The most frequent and devastating of these species are F. sambucinum, F. solani and F. oxysporum, depending on the geographic location and the season. Samples of potato tubers with dry rot symptoms were collected, and their putative fungal isolates were identified as Fusarium species using partial nucleotide sequences of the internal transcribed spacer, translation elongation factor 1-α and β-tubulin genes. Among 149 isolates, 12 species were identified. F. oxysporum was the most frequent (45 % of the isolates), followed by F. avenaceum (12.1 %), F. solani (10.7 %) and F. sambucinum (7.4 %). Phylogenetic analyses confirmed the species identifications and revealed a high diversity of F. solani and a low diversity of F. oxysporum. Potential producers of zearalenone and trichothecenes were identified within the obtained isolates using PCR markers. Isolates that were pathogenic to potatoes in laboratory tests were found in four species: F. sambucinum, F. avenaceum, F. culmorum, and F. graminearum. The effects of increased temperature and mixed inoculum on the pathogenicities of chosen species were evaluated. This study adds 434 potato-derived Fusarium sequences to the NCBI GenBank database and demonstrates that the list of Fusarium species and mycotoxins present in potato tubers may be richer than previously believed, regardless of whether these species cause dry rot or live as saprophytes. |
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0929-1873 1573-8469 |
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CropM, ft_macsur |
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MA @ admin @ |
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4721 |
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