| Records |
| Author |
Brylińska, M.; Sobkowiak, S.; Stefańczyk, E.; Śliwka, J. |
| Title |
Potato cultivation system affects population structure of Phytophthora infestans |
Type |
Journal Article |
| Year |
2016 |
Publication  |
Fungal Ecology |
Abbreviated Journal |
Fungal Ecology |
| Volume |
20 |
Issue |
|
Pages |
132-143 |
| Keywords |
SSR; Population genetic structure; Late blight; Potato; late blight resistance; mating-type; microsatellite markers; phenotypic diversity; sexual reproduction; genotypic diversity; nordic countries; severe outbreaks; sarpo mira; pathogenicity |
| Abstract |
Phytophthora infestans is one of the most destructive potato pathogens. Many factors influence the population structure of P. infestans, including migration, climate and type of potato cultivation. Here, we analyse 365 P. infestans isolates collected from three regions of Poland over three years. We determined mating type, mitochondrial haplotype, resistance to metalaxyl, virulence and polymorphism at 14 simple sequence repeat (SSR) loci. Analysis of SSR markers showed high genetic diversity associated with this population. Model-based structure analysis grouped 299 unique genotypes into four main clusters. The P. infestans isolates collected from the Mlochow region, which has the most intensive level of potato cultivation, formed a distinct cluster, indicating a strong effect of the cultivation system on pathogen population structure. Three clusters contained isolates with frequent presence of three alleles at one locus, which may affect their capacity for sexual reproduction and preserve groups of fit genotypes that propagate asexually. (C) 2016 Elsevier Ltd and The British Mycological Society. |
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| Language |
English |
Summary Language |
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Series Title |
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Abbreviated Series Title |
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| Series Volume |
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Series Issue |
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Edition |
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| ISSN |
1754-5048 |
ISBN |
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Medium |
Article |
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Expedition |
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Conference |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4720 |
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| Author |
Bannink, A.; van Lingen, H.J.; Ellis, J.L.; France, J.; Dijkstra, J. |
| Title |
The contribution of mathematical modeling to understanding dynamic aspects of rumen metabolism |
Type |
Journal Article |
| Year |
2016 |
Publication |
Frontiers in Microbiology |
Abbreviated Journal |
Frontiers in Microbiology |
| Volume |
7 |
Issue |
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Pages |
1820 |
| Keywords |
lactating dairy-cows; milk urea concentration; fatty-acid production; ruminal fermentation; mechanistic model; holstein cows; beef-cattle; stoichiometric parameters; methane production; feeding frequency |
| Abstract |
All mechanistic rumen models cover the main drivers of variation in rumen function, which are feed intake, the differences between feedstuffs and feeds in their intrinsic rumen degradation characteristics, and fractional outflow rate of fluid and particulate matter. Dynamic modeling approaches are best suited to the prediction of more nuanced responses in rumen metabolism, and represent the dynamics of the interactions between substrates and micro-organisms and inter-microbial interactions. The concepts of dynamics are discussed for the case of rumen starch digestion as influenced by starch intake rate and frequency of feed intake, and for the case of fermentation of fiber in the large intestine. Adding representations of new functional classes of micro-organisms (i.e., with new characteristics from the perspective of whole rumen function) in rumen models only delivers new insights if complemented by the dynamics of their interactions with other functional classes. Rumen fermentation conditions have to be represented due to their profound impact on the dynamics of substrate degradation and microbial metabolism. Although the importance of rumen pH is generally acknowledged, more emphasis is needed on predicting its variation as well as variation in the processes that underlie rumen fluid dynamics. The rumen wall has an important role in adapting to rapid changes in the rumen environment, clearing of volatile fatty acids (VFA), and maintaining rumen pH within limits. Dynamics of rumen wall epithelia and their role in VFA absorption needs to be better represented in models that aim to predict rumen responses across nutritional or physiological states. For a detailed prediction of rumen N balance there is merit in a dynamic modeling approach compared to the static approaches adopted in current protein evaluation systems. Improvement is needed on previous attempts to predict rumen VFA profiles, and this should be pursued by introducing factors that relate more to microbial metabolism. For rumen model construction, data on rumen microbiomes are preferably coupled with knowledge consolidated in rumen models instead of relying on correlations with rather general aspects of treatment or animal. This helps to prevent the disregard of basic principles and underlying mechanisms of whole rumen function. |
| Address |
2017-01-06 |
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English |
Summary Language |
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Series Issue |
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Edition |
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| ISSN |
1664-302x |
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Conference |
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| Notes |
LiveM, ft_MACSUR |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4932 |
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| Author |
Tao, F.; Zhang, Z.; Zhang, S.; Rötter, R.P.; Shi, W.; Xiao, D.; Liu, Y.; Wang, M.; Liu, F.; Zhang, H. |
| Title |
Historical data provide new insights into response and adaptation of maize production systems to climate change/variability in China |
Type |
Journal Article |
| Year |
2016 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
| Volume |
185 |
Issue |
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Pages |
1-11 |
| Keywords |
china; climate variability; grain yield; impact; maize; northeast china; tropical maize; wheat yields; heat-stress; crop yields; temperature; impacts; sensitivities; hybrids; trends |
| Abstract |
Extensive studies had been conducted to investigate the impacts of climate change on maize growth and yield in recent decades; however, the dynamics of crop husbandry in response and adaptation to climate change were not taken into account. Based on field observations spanning from 1981 to 2009 at 167 agricultural meteorological stations across China, we found that solar radiation and temperature over the observed maize growth period had decreasing trends during 1981-2009, and maize yields were positively correlated with these climate variables in major production regions. The decreasing trends in solar radiation and temperature during maize growth period were mainly ascribed to the adoption of late maturity cultivars with longer reproductive growth period (RGP). The adoption of late maturing cultivars with longer RGP contributed substantially to grain yield increase during the last three decades. The climate trends during maize growth period varied among different production areas. During 1981-2009, decreases in mean temperature, precipitation and solar radiation over maize growth period jointly reduced yield most by 13.2-17.3% in southwestern China, by contrast in northwestern China increases in mean temperature, precipitation and solar radiation jointly increased yield most by 12.9-14.4%. Our findings highlight that the adaptations of maize production system to climate change through shifts of sowing date and genotypes are underway and should be taken into accounted when evaluating climate change impacts. (C) 2015 Elsevier B.V. All rights reserved. |
| Address |
2016-10-31 |
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| Language |
English |
Summary Language |
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Original Title |
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Series Title |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
0378-4290 |
ISBN |
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Medium |
Article |
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Expedition |
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Conference |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4816 |
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| Author |
Cammarano, D.; Rötter, R.P.; Asseng, S.; Ewert, F.; Wallach, D.; Martre, P.; Hatfield, J.L.; Jones, J.W.; Rosenzweig, C.; Ruane, A.C.; Boote, K.J.; Thorburn, P.J.; Kersebaum, K.C.; Aggarwal, P.K.; Angulo, C.; Basso, B.; Bertuzzi, P.; Biernath, C.; Brisson, N.; Challinor, A.J.; Doltra, J.; Gayler, S.; Goldberg, R.; Heng, L.; Hooker, J.E.; Hunt, L.A.; Ingwersen, J.; Izaurralde, R.C.; Müller, C.; Kumar, S.N.; Nendel, C.; O’Leary, G.; Olesen, J.E.; Osborne, T.M.; Priesack, E.; Ripoche, D.; Steduto, P.; Stöckle, C.O.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.; Travasso, M.; Waha, K.; White, J.W.; Wolf, J. |
| Title |
Uncertainty of wheat water use: Simulated patterns and sensitivity to temperature and CO2 |
Type |
Journal Article |
| Year |
2016 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
| Volume |
198 |
Issue |
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Pages |
80-92 |
| Keywords |
Multi-model simulation; Transpiration efficiency; Water use; Uncertainty; Sensitivity |
| Abstract |
Projected global warming and population growth will reduce future water availability for agriculture. Thus, it is essential to increase the efficiency in using water to ensure crop productivity. Quantifying crop water use (WU; i.e. actual evapotranspiration) is a critical step towards this goal. Here, sixteen wheat simulation models were used to quantify sources of model uncertainty and to estimate the relative changes and variability between models for simulated WU, water use efficiency (WUE, WU per unit of grain dry mass produced), transpiration efficiency (Teff, transpiration per kg of unit of grain yield dry mass produced), grain yield, crop transpiration and soil evaporation at increased temperatures and elevated atmospheric carbon dioxide concentrations ([CO2]). The greatest uncertainty in simulating water use, potential evapotranspiration, crop transpiration and soil evaporation was due to differences in how crop transpiration was modelled and accounted for 50% of the total variability among models. The simulation results for the sensitivity to temperature indicated that crop WU will decline with increasing temperature due to reduced growing seasons. The uncertainties in simulated crop WU, and in particularly due to uncertainties in simulating crop transpiration, were greater under conditions of increased temperatures and with high temperatures in combination with elevated atmospheric [CO2] concentrations. Hence the simulation of crop WU, and in particularly crop transpiration under higher temperature, needs to be improved and evaluated with field measurements before models can be used to simulate climate change impacts on future crop water demand. |
| Address |
2016-10-31 |
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English |
Summary Language |
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Original Title |
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Series Title |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
0378-4290 |
ISBN |
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Article |
| Area |
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Expedition |
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Conference |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4786 |
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| Author |
Maiorano, A.; Martre, P.; Asseng, S.; Ewert, F.; Müller, C.; Rötter, R.P.; Ruane, A.C.; Semenov, M.A.; Wallach, D.; Wang, E.; Alderman, P.D.; Kassie, B.T.; Biernath, C.; Basso, B.; Cammarano, D.; Challinor, A.J.; Doltra, J.; Dumont, B.; Rezaei, E.E.; Gayler, S.; Kersebaum, K.C.; Kimball, B.A.; Koehler, A.-K.; Liu, B.; O’Leary, G.J.; Olesen, J.E.; Ottman, M.J.; Priesack, E.; Reynolds, M.; Stratonovitch, P.; Streck, T.; Thorburn, P.J.; Waha, K.; Wall, G.W.; White, J.W.; Zhao, Z.; Zhu, Y. |
| Title |
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles |
Type |
Journal Article |
| Year |
2016 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
| Volume |
202 |
Issue |
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Pages |
5-20 |
| Keywords |
Impact uncertainty; High temperature; Model improvement; Multi-model ensemble; Wheat crop model |
| Abstract |
To improve climate change impact estimates and to quantify their uncertainty, multi-model ensembles (MMEs) have been suggested. Model improvements can improve the accuracy of simulations and reduce the uncertainty of climate change impact assessments. Furthermore, they can reduce the number of models needed in a MME. Herein, 15 wheat growth models of a larger MME were improved through re-parameterization and/or incorporating or modifying heat stress effects on phenology, leaf growth and senescence, biomass growth, and grain number and size using detailed field experimental data from the USDA Hot Serial Cereal experiment (calibration data set). Simulation results from before and after model improvement were then evaluated with independent field experiments from a CIMMYT world-wide field trial network (evaluation data set). Model improvements decreased the variation (10th to 90th model ensemble percentile range) of grain yields simulated by the MME on average by 39% in the calibration data set and by 26% in the independent evaluation data set for crops grown in mean seasonal temperatures >24 °C. MME mean squared error in simulating grain yield decreased by 37%. A reduction in MME uncertainty range by 27% increased MME prediction skills by 47%. Results suggest that the mean level of variation observed in field experiments and used as a benchmark can be reached with half the number of models in the MME. Improving crop models is therefore important to increase the certainty of model-based impact assessments and allow more practical, i.e. smaller MMEs to be used effectively. |
| Address |
2016-09-13 |
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Language |
Summary Language |
Newsletter July 2016 |
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0378-4290 |
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Article |
| Area |
CropM |
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Conference |
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| Notes |
CropMwp;wos; ft=macsur; wsnot_yet; |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4776 |
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