| Records |
| Author |
Tao, F.; Roetter, R.P.; Palosuo, T.; Diaz-Ambrona, C.G.H.; Ines Minguez, M.; Semenov, M.A.; Kersebaum, K.C.; Nendel, C.; Cammarano, D.; Hoffmann, H.; Ewert, F.; Dambreville, A.; Martre, P.; Rodriguez, L.; Ruiz-Ramos, M.; Gaiser, T.; Hohn, J.G.; Salo, T.; Ferrise, R.; Bindi, M.; Schulman, A.H. |
| Title |
Designing future barley ideotypes using a crop model ensemble |
Type |
Journal Article |
| Year |
2017 |
Publication  |
European Journal of Agronomy |
Abbreviated Journal |
Europ. J. Agron. |
| Volume |
82 |
Issue |
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Pages |
144-162 |
| Keywords |
Water-Use Efficiency; Climate-Change; Nitrogen Dynamics; Systems; Simulation; Wheat Cultivars; Grain Weight; Yield; Growth; Fertilization; Adaptation; Adaptation; Breeding; Climate change; Crop simulation models; Impact; Genotype; Genetic traits |
| Abstract |
Climate change and its associated higher frequency and severity of adverse weather events require genotypic adaptation. Process-based ecophysiological modelling offers a powerful means to better target and accelerate development of new crop cultivars. Barley (Hordeum vulgare L) is an important crop throughout the world, and a good model for study of the genetics of stress adaptation because many quantitative trait loci and candidate genes for biotic and abiotic stress tolerance have been identified in it. Here, we developed a new approach to design future crop ideotypes using an ensemble of eight barley simulation models (i.e. APSIM, CropSyst, HERMES, MCWLA, MONICA, SIMPLACE, Sirius Quality, and WOFOST), and applied it to design climate-resilient barley ideotypes for Boreal and Mediterranean climatic zones in Europe. The results showed that specific barley genotypes, represented by sets of cultivar parameters in the crop models, could be promising under future climate change conditions, resulting in increased yields and low inter-annual yield variability. In contrast, other genotypes could result in substantial yield declines. The most favorable climate-zone-specific barley ideotypes were further proposed, having combinations of several key genetic traits in terms of phenology, leaf growth, photosynthesis, drought tolerance, and grain formation. For both Boreal and Mediterranean climatic zones, barley ideotypes under future climatic conditions should have a longer reproductive growing period, lower leaf senescence rate, larger radiation use efficiency or maximum assimilation rate, and higher drought tolerance. Such characteristics can produce substantial positive impacts on yields under contrasting conditions. Moreover, barley ideotypes should have a low photoperiod and high vernalization sensitivity for the Boreal climatic zone; for the Mediterranean, in contrast, it should have a low photoperiod and low vernalization sensitivity. The drought-tolerance trait is more beneficial for the Mediterranean than for the Boreal climatic zone. Our study demonstrates a sound approach to design future barley ideotypes based on an ensemble of well-tested, diverse crop models and on integration of knowledge from multiple disciplines. The robustness of model-aided ideotypes design can be further enhanced by continuously improving crop models and enhancing information exchange between modellers, agro-meteorologists, geneticists, physiologists, and plant breeders. (C) 2016 Elsevier B.V. All rights reserved. |
| Address |
2017-01-20 |
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| Language |
English |
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Edition |
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| ISSN |
1161-0301 |
ISBN |
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Article |
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Conference |
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| Notes |
CropM, ft_MACSUR |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4935 |
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| Author |
Ginaldi, F.; Bindi, M.; Marta, A.D.; Ferrise, R.; Orlandini, S.; Danuso, F. |
| Title |
Interoperability of agronomic long term experiment databases and crop model intercomparison: the Italian experience |
Type |
Journal Article |
| Year |
2016 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
Europ. J. Agron. |
| Volume |
77 |
Issue |
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Pages |
209-222 |
| Keywords |
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| Abstract |
• ICFAR-DB organises and stores data from 16 Italian long term agronomic experiments. • ICFAR-DB fulfils interoperability using system dynamics ontology and AgMIP nomenclature. • ICFAR information management system moves closer data to model and vice versa. The IC-FAR national project (Linking long term observatories with crop system modelling for better understanding of climate change impact, and adaptation strategies for Italian cropping systems) initiated in 2013 with the primary aim of implementing data from 16 long term Italian agronomic experiments in a common, interoperable structure. The building of a common database (DB) structure demands a harmonization process aimed at standardising concepts, language and data in order to make them clear, and has to produce a well-documented and easily available tool for the whole scientific community. The Agricultural Model Intercomparison and Improvement Project (AgMIP) has made a great effort in this sense, improving the vocabulary developed by the International Consortium for Agricultural Systems Applications (ICASA) and defining harmonization procedures. Nowadays, these ones have also to be addressed to facilitate the extraction of input files for crop model simulations. Substantially, two alternative directions can be pursued: adapting data to models, building a standard storage structure and using translators that convert DB information to model input files; or adapting models to data, using the same storage structure for feeding modelling solutions constituted by combining model components, re-implemented in the same model platform. The ICFAR information management system simplifies data entry, improves model input extraction (implementing System Dynamics ontology), and satisfies both the paradigms. This has required the development of different software tools: ICFAR-DB for data entry and storage; a model input extractor for feeding the crop models (MoLInEx); SEMoLa platform for building modelling solutions and performing via scripts the model intercomparison. The use of the standard AgMIP/ICASA nomenclature in the ICFAR-DB and the opportunity to create files with MoLInex for feeding AgMIP model translators allow full system interoperability. |
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1161-0301 |
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article |
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| Notes |
CropM, ftnotmacsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4972 |
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| Author |
Zhao, G.; Hoffmann, H.; Yeluripati, J.; Xenia, S.; Nendel, C.; Coucheney, E.; Kuhnert, M.; Tao, F.; Constantin, J.; Raynal, H.; Teixeira, E.; Grosz, B.; Doro, L.; Kiese, R.; Eckersten, H.; Haas, E.; Cammarano, D.; Kassie, B.; Moriondo, M.; Trombi, G.; Bindi, M.; Biernath, C.; Heinlein, F.; Klein, C.; Priesack, E.; Lewan, E.; Kersebaum, K.-C.; Rötter, R.; Roggero, P.P.; Wallach, D.; Asseng, S.; Siebert, S.; Gaiser, T.; Ewert, F. |
| Title |
Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops |
Type |
Journal Article |
| Year |
2016 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
| Volume |
80 |
Issue |
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Pages |
100-112 |
| Keywords |
Crop model; Stratified random sampling; Simple random sampling; Clustering; Up-scaling; Model comparison; Precision gain; species distribution models; systems simulation; weather data; large-scale; design; soil; optimization; growth; apsim; autocorrelation |
| Abstract |
We compared the precision of simple random sampling (SimRS) and seven types of stratified random sampling (StrRS) schemes in estimating regional mean of water-limited yields for two crops (winter wheat and silage maize) that were simulated by fourteen crop models. We found that the precision gains of StrRS varied considerably across stratification methods and crop models. Precision gains for compact geographical stratification were positive, stable and consistent across crop models. Stratification with soil water holding capacity had very high precision gains for twelve models, but resulted in negative gains for two models. Increasing the sample size monotonously decreased the sampling errors for all the sampling schemes. We conclude that compact geographical stratification can modestly but consistently improve the precision in estimating regional mean yields. Using the most influential environmental variable for stratification can notably improve the sampling precision, especially when the sensitivity behavior of a crop model is known. |
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English |
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1364-8152 |
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Article |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4724 |
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| Author |
Moriondo, M.; Ferrise, R.; Trombi, G.; Brilli, L.; Dibari, C.; Bindi, M. |
| Title |
Modelling olive trees and grapevines in a changing climate |
Type |
Journal Article |
| Year |
2015 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
| Volume |
72 |
Issue |
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Pages |
387-401 |
| Keywords |
tree crops; climate change; simulation models; crop yield; vitis-vinifera l.; air co2 enrichment; soil-water content; elevated co2; mediterranean basin; cropping systems; growth; yield; carbon; simulation |
| Abstract |
The models developed for simulating olive tree and grapevine yields were reviewed by focussing on the major limitations of these models for their application in a changing climate. Empirical models, which exploit the statistical relationship between climate and yield, and process based models, where crop behaviour is defined by a range of relationships describing the main plant processes, were considered. The results highlighted that the application of empirical models to future climatic conditions (i.e. future climate scenarios) is unreliable since important statistical approaches and predictors are still lacking. While process-based models have the potential for application in climate-change impact assessments, our analysis demonstrated how the simulation of many processes affected by warmer and CO2-enriched conditions may give rise to important biases. Conversely, some crop model improvements could be applied at this stage since specific sub-models accounting for the effect of elevated temperatures and CO2 concentration were already developed. (C) 2014 Elsevier Ltd. All rights reserved. |
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1364-8152 |
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| Notes |
CropM, ftnotmacsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4691 |
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| Author |
Kersebaum, K.C.; Boote, K.J.; Jorgenson, J.S.; Nendel, C.; Bindi, M.; Frühauf, C.; Gaiser, T.; Hoogenboom, G.; Kollas, C.; Olesen, J.E.; Rötter, R.P.; Ruget, F.; Thorburn, P.J.; Trnka, M.; Wegehenkel, M. |
| Title |
Analysis and classification of data sets for calibration and validation of agro-ecosystem models |
Type |
Journal Article |
| Year |
2015 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
| Volume |
72 |
Issue |
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Pages |
402-417 |
| Keywords |
field experiments; data quality; crop modelling; data requirement; minimum data; software; different climatic zones; soil-moisture sensors; spatial variability; nitrogen dynamics; crop models; systems simulation; wheat yields; elevated co2; growth; field |
| Abstract |
Experimental field data are used at different levels of complexity to calibrate, validate and improve agroecosystem models to enhance their reliability for regional impact assessment. A methodological framework and software are presented to evaluate and classify data sets into four classes regarding their suitability for different modelling purposes. Weighting of inputs and variables for testing was set from the aspect of crop modelling. The software allows users to adjust weights according to their specific requirements. Background information is given for the variables with respect to their relevance for modelling and possible uncertainties. Examples are given for data sets of the different classes. The framework helps to assemble high quality data bases, to select data from data bases according to modellers requirements and gives guidelines to experimentalists for experimental design and decide on the most effective measurements to improve the usefulness of their data for modelling, statistical analysis and data assimilation. (C) 2015 Elsevier Ltd. All rights reserved. |
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English |
Summary Language |
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Original Title |
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Series Title |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
1364-8152 |
ISBN |
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Medium |
Article |
| Area |
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Expedition |
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Conference |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4563 |
| Permanent link to this record |
