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Bannink, A.; van Lingen, H.J.; Ellis, J.L.; France, J.; Dijkstra, J. |
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Title |
The contribution of mathematical modeling to understanding dynamic aspects of rumen metabolism |
Type |
Journal Article |
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Year |
2016 |
Publication  |
Frontiers in Microbiology |
Abbreviated Journal |
Frontiers in Microbiology |
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Volume |
7 |
Issue |
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Pages |
1820 |
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Keywords |
lactating dairy-cows; milk urea concentration; fatty-acid production; ruminal fermentation; mechanistic model; holstein cows; beef-cattle; stoichiometric parameters; methane production; feeding frequency |
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Abstract |
All mechanistic rumen models cover the main drivers of variation in rumen function, which are feed intake, the differences between feedstuffs and feeds in their intrinsic rumen degradation characteristics, and fractional outflow rate of fluid and particulate matter. Dynamic modeling approaches are best suited to the prediction of more nuanced responses in rumen metabolism, and represent the dynamics of the interactions between substrates and micro-organisms and inter-microbial interactions. The concepts of dynamics are discussed for the case of rumen starch digestion as influenced by starch intake rate and frequency of feed intake, and for the case of fermentation of fiber in the large intestine. Adding representations of new functional classes of micro-organisms (i.e., with new characteristics from the perspective of whole rumen function) in rumen models only delivers new insights if complemented by the dynamics of their interactions with other functional classes. Rumen fermentation conditions have to be represented due to their profound impact on the dynamics of substrate degradation and microbial metabolism. Although the importance of rumen pH is generally acknowledged, more emphasis is needed on predicting its variation as well as variation in the processes that underlie rumen fluid dynamics. The rumen wall has an important role in adapting to rapid changes in the rumen environment, clearing of volatile fatty acids (VFA), and maintaining rumen pH within limits. Dynamics of rumen wall epithelia and their role in VFA absorption needs to be better represented in models that aim to predict rumen responses across nutritional or physiological states. For a detailed prediction of rumen N balance there is merit in a dynamic modeling approach compared to the static approaches adopted in current protein evaluation systems. Improvement is needed on previous attempts to predict rumen VFA profiles, and this should be pursued by introducing factors that relate more to microbial metabolism. For rumen model construction, data on rumen microbiomes are preferably coupled with knowledge consolidated in rumen models instead of relying on correlations with rather general aspects of treatment or animal. This helps to prevent the disregard of basic principles and underlying mechanisms of whole rumen function. |
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2017-01-06 |
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English |
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1664-302x |
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LiveM, ft_MACSUR |
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Call Number |
MA @ admin @ |
Serial |
4932 |
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Author |
Brylińska, M.; Sobkowiak, S.; Stefańczyk, E.; Śliwka, J. |
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Title |
Potato cultivation system affects population structure of Phytophthora infestans |
Type |
Journal Article |
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Year |
2016 |
Publication |
Fungal Ecology |
Abbreviated Journal |
Fungal Ecology |
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Volume |
20 |
Issue |
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Pages |
132-143 |
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Keywords |
SSR; Population genetic structure; Late blight; Potato; late blight resistance; mating-type; microsatellite markers; phenotypic diversity; sexual reproduction; genotypic diversity; nordic countries; severe outbreaks; sarpo mira; pathogenicity |
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Abstract |
Phytophthora infestans is one of the most destructive potato pathogens. Many factors influence the population structure of P. infestans, including migration, climate and type of potato cultivation. Here, we analyse 365 P. infestans isolates collected from three regions of Poland over three years. We determined mating type, mitochondrial haplotype, resistance to metalaxyl, virulence and polymorphism at 14 simple sequence repeat (SSR) loci. Analysis of SSR markers showed high genetic diversity associated with this population. Model-based structure analysis grouped 299 unique genotypes into four main clusters. The P. infestans isolates collected from the Mlochow region, which has the most intensive level of potato cultivation, formed a distinct cluster, indicating a strong effect of the cultivation system on pathogen population structure. Three clusters contained isolates with frequent presence of three alleles at one locus, which may affect their capacity for sexual reproduction and preserve groups of fit genotypes that propagate asexually. (C) 2016 Elsevier Ltd and The British Mycological Society. |
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1754-5048 |
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CropM, ft_macsur |
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MA @ admin @ |
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4720 |
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Yang, H.; Dobbie, S.; Ramirez-Villegas, J.; Feng, K.; Challinor, A.J.; Chen, B.; Gao, Y.; Lee, L.; Yin, Y.; Sun, L.; Watson, J.; Koehler, A.-K.; Fan, T.; Ghosh, S. |
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Title |
Potential negative consequences of geoengineering on crop production: A study of Indian groundnut |
Type |
Journal Article |
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Year |
2016 |
Publication |
Geophysical Research Letters |
Abbreviated Journal |
Geophys. Res. Let. |
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Volume |
43 |
Issue |
22 |
Pages |
11786-11795 |
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Keywords |
Mangrove Tidal Creek; Land-Ocean Boundary; Carbon-Dioxide; Organic-Matter; River Estuary; European Estuaries; CO2 Fluxes; NE Coast; Water; Bay; fCO(2) (water); air-water CO2 flux; Hugli Estuary; Matla Estuary; Blue Carbon; source of CO2 |
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Geoengineering has been proposed to stabilize global temperature, but its impacts on crop production and stability are not fully understood. A few case studies suggest that certain crops are likely to benefit from solar dimming geoengineering, yet we show that geoengineering is projected to have detrimental effects for groundnut. Using an ensemble of crop-climate model simulations, we illustrate that groundnut yields in India undergo a statistically significant decrease of up to 20% as a result of solar dimming geoengineering relative to RCP4.5. It is somewhat reassuring, however, to find that after a sustained period of 50 years of geoengineering crop yields return to the nongeoengineered values within a few years once the intervention is ceased. |
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2017-01-20 |
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ISSN |
0094-8276 |
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CropM, ft_MACSUR |
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Call Number |
MA @ admin @ |
Serial |
4936 |
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Author |
Bennetzen, E.H.; Smith, P.; Porter, J.R. |
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Title |
Decoupling of greenhouse gas emissions from global agricultural production: 1970-2050 |
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Journal Article |
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Year |
2016 |
Publication |
Global Change Biology |
Abbreviated Journal |
Glob. Chang. Biol. |
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Volume |
22 |
Issue |
2 |
Pages |
763-781 |
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Keywords |
climate change; energy use; global agriculture; greenhouse gas emissions; land use; mitigation; sustainable intensification |
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Abstract |
Since 1970 global agricultural production has more than doubled; contributing ~1/4 of total anthropogenic greenhouse gas (GHG) burden in 2010. Food production must increase to feed our growing demands, but to address climate change, GHG emissions must decrease. Using an identity approach, we estimate and analyse past trends in GHG emission intensities from global agricultural production and land-use change and project potential future emissions. The novel Kaya-Porter identity framework deconstructs the entity of emissions from a mix of multiple sources of GHGs into attributable elements allowing not only a combined analysis of the total level of all emissions jointly with emissions per unit area and emissions per unit product. It also allows us to examine how a change in emissions from a given source contributes to the change in total emissions over time. We show that agricultural production and GHGs have been steadily decoupled over recent decades. Emissions peaked in 1991 at ~12 Pg CO2 -eq. yr(-1) and have not exceeded this since. Since 1970 GHG emissions per unit product have declined by 39% and 44% for crop- and livestock-production, respectively. Except for the energy-use component of farming, emissions from all sources have increased less than agricultural production. Our projected business-as-usual range suggests that emissions may be further decoupled by 20-55% giving absolute agricultural emissions of 8.2-14.5 Pg CO2 -eq. yr(-1) by 2050, significantly lower than many previous estimates that do not allow for decoupling. Beyond this, several additional costcompetitive mitigation measures could reduce emissions further. However, agricultural GHG emissions can only be reduced to a certain level and a simultaneous focus on other parts of the food-system is necessary to increase food security whilst reducing emissions. The identity approach presented here could be used as a methodological framework for more holistic food systems analysis. |
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1354-1013 |
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CropM, ftnotmacsur |
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MA @ admin @ |
Serial |
4706 |
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Author |
Bennetzen, E.H.; Smith, P.; Porter, J.R. |
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Title |
Agricultural production and greenhouse gas emissions from world regions—The major trends over 40 years |
Type |
Journal Article |
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Year |
2016 |
Publication |
Global Environmental Change |
Abbreviated Journal |
Glob. Environ. Change |
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Volume |
37 |
Issue |
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43-55 |
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Keywords |
Agriculture; Greenhouse gas intensity; Climate change; Kaya-Porter; identity; Decoupling emissions; Kaya-identity; land-use change; carbon-dioxide emissions; sustainable intensification; livestock production; forest transitions; global agriculture; crop; production; food security; deforestation; mitigation |
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Abstract |
Since 1970, global agricultural production has more than doubled with agriculture and land-use change now responsible for similar to 1/4 of greenhouse gas emissions from human activities. Yet, while greenhouse gas (GHG) emissions per unit of agricultural product have been reduced at a global level, trends in world regions have been quantified less thoroughly. The KPI (Kaya-Porter Identity) is a novel framework for analysing trends in agricultural production and land-use change and related GHG emissions. We apply this to assess trends and differences in nine world regions over the period 1970-2007. We use a deconstructed analysis of emissions from the mix of multiple sources, and show how each is changing in terms of absolute emissions on a per area and per produced unit basis, and how the change of emissions from each source contributes to the change in total emissions over time. The doubling of global agricultural production has mainly been delivered by developing and transitional countries, and this has been mirrored by increased GHG emissions. The decoupling of emissions from production shows vast regional differences. Our estimates show that emissions per unit crop (as kg CO2-equivalents per Giga Joule crop product), in Oceania, have been reduced by 94% from 1093 to 69; in Central & South America by 57% from 849 to 362; in sub-Saharan Africa by 27% from 421 to 309, and in Europe by 56% from 86 to 38. Emissions per unit livestock (as kg CO2-eq. GJ(-1) livestock product) have reduced; in sub-Saharan Africa by 24% from 6001 to 4580; in Central & South America by 61% from 3742 to 1448; in Central & Eastern Asia by 82% from 3,205 to 591, and; in North America by 28% from 878 to 632. In general, intensive and industrialised systems show the lowest emissions per unit of agricultural production. (C) 2016 Elsevier Ltd. All rights reserved. |
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0959-3780 |
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CropM, ftnotmacsur |
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MA @ admin @ |
Serial |
4758 |
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