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Persson, T., & Kværnø, S. (2017). Impact of projected mid-21st century climate and soil extrapolation on simulated spring wheat grain yield in Southeastern Norway. J. Agric. Sci., 155(03), 361–377.
Abstract: The effects of soil variability on regional crop yield under projected climate change are largely unknown. In Southeastern Norway, increased temperature and precipitation are projected for the mid-21st century. Crop simulation models in combination with scaling techniques can be used to determine the regional pattern of crop yield. In the present paper, the CSM-CROPSIM-CERES-Wheat model was applied to simulate regional spring wheat yield for Akershus and Østfold counties in Southeastern Norway. Prior to the simulations, parameters in the CSM-CROPSIM-CERES-Wheat model were calibrated for the spring wheat cvars Zebra, Demonstrant and Bjarne, using cultivar trial data from Southeastern Norway and site-specific weather and soil information. Weather input data for regional yield simulations represented the climate in 1961–1990 and projections of the climate in 2046–2065. The latter were based on four Global Climate Models and greenhouse gas emission scenario A1B in the IPCC 4th Assessment Report. Data on regional soil particle size distribution, water-holding characteristics and organic matter data were obtained from a database. To determine the simulated grain yield sensitivity to soil input, the number of soil profiles used to describe the soilscape in the region varied from 76 to 16, 5 and 1. The soils in the different descriptions were selected by arranging them into groups according to similarities in physical characteristics and taking the soil in each group occupying the largest area in the region to represent other soils in that group. The simulated grain yields were higher under all four projected future climate scenarios than the corresponding average yields in the baseline conditions. On average across the region, there were mostly non-significant differences in grain yield between the soil extrapolations for all cultivars and climate projections. However, for sub-regions grain yield varied by up to 20% between soil extrapolations. These results indicate how projected climate change could affect spring wheat yield given the assumed simulated conditions for a region with similar climate and soil conditions to many other cereal production regions in Northern Europe. The results also provide useful information about how soil input data could be handled in regional crop yield determinations under these conditions.
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Hjelkrem, A. - G. R., Höglind, M., van Oijen, M., Schellberg, J., Gaiser, T., & Ewert, F. (2017). Sensitivity analysis and Bayesian calibration for testing robustness of the BASGRA model in different environments. Ecol. Model., 359, 80–91.
Abstract: Highlights • The parameters to be fixed were consistent across sites. • Model calibration must be performed separately for each specific case. • Possible to reduce model parameters from 66 to 45. • Strong model reductions must be avoided. • The error term for the training data were characterised by timing (phase shift). Abstract Proper parameterisation and quantification of model uncertainty are two essential tasks in improvement and assessment of model performance. Bayesian calibration is a method that combines both tasks by quantifying probability distributions for model parameters and outputs. However, the method is rarely applied to complex models because of its high computational demand when used with high-dimensional parameter spaces. We therefore combined Bayesian calibration with sensitivity analysis, using the screening method by Morris (1991), in order to reduce model complexity by fixing parameters to which model output was only weakly sensitive to a nominal value. Further, the robustness of the model with respect to reduction in the number of free parameters were examined according to model discrepancy and output uncertainty. The process-based grassland model BASGRA was examined in the present study on two sites in Norway and in Germany, for two grass species (Phleum pratense and Arrhenatherum elatius). According to this study, a reduction of free model parameters from 66 to 45 was possible. The sensitivity analysis showed that the parameters to be fixed were consistent across sites (which differed in climate and soil conditions), while model calibration had to be performed separately for each combination of site and species. The output uncertainty decreased slightly, but still covered the field observations of aboveground biomass. Considering the training data, the mean square error for both the 66 and the 45 parameter model was dominated by errors in timing (phase shift), whereas no general pattern was found in errors when using the validation data. Stronger model reduction should be avoided, as the error term increased and output uncertainty was underestimated.
Keywords: Metropolis-hasting; Morris method; Reducing complexity; Robustness
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Raymundo, R., Asseng, S., Prassad, R., Kleinwechter, U., Concha, J., Condori, B., et al. (2017). Performance of the SUBSTOR-potato model across contrasting growing conditions. Field Crops Research, 202, 57–76.
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Fleisher, D. H., Condori, B., Quiroz, R., Alva, A., Asseng, S., Barreda, C., et al. (2017). A potato model intercomparison across varying climates and productivity levels. Glob. Chang. Biol., 23(3), 1258–1281.
Abstract: A potato crop multimodel assessment was conducted to quantify variation among models and evaluate responses to climate change. Nine modeling groups simulated agronomic and climatic responses at low-input (Chinoli, Bolivia and Gisozi, Burundi)- and high-input (Jyndevad, Denmark and Washington, United States) management sites. Two calibration stages were explored, partial (P1), where experimental dry matter data were not provided, and full (P2). The median model ensemble response outperformed any single model in terms of replicating observed yield across all locations. Uncertainty in simulated yield decreased from 38% to 20% between P1 and P2. Model uncertainty increased with interannual variability, and predictions for all agronomic variables were significantly different from one model to another (P < 0.001). Uncertainty averaged 15% higher for low- vs. high-input sites, with larger differences observed for evapotranspiration (ET), nitrogen uptake, and water use efficiency as compared to dry matter. A minimum of five partial, or three full, calibrated models was required for an ensemble approach to keep variability below that of common field variation. Model variation was not influenced by change in carbon dioxide (C), but increased as much as 41% and 23% for yield and ET, respectively, as temperature (T) or rainfall (W) moved away from historical levels. Increases in T accounted for the highest amount of uncertainty, suggesting that methods and parameters for T sensitivity represent a considerable unknown among models. Using median model ensemble values, yield increased on average 6% per 100-ppm C, declined 4.6% per °C, and declined 2% for every 10% decrease in rainfall (for nonirrigated sites). Differences in predictions due to model representation of light utilization were significant (P < 0.01). These are the first reported results quantifying uncertainty for tuber/root crops and suggest modeling assessments of climate change impact on potato may be improved using an ensemble approach.
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Barber, H. M., Lukac, M., Simmonds, J., Semenov, M. A., & Gooding, M. J. (2017). Temporally and Genetically Discrete Periods of Wheat Sensitivity to High Temperature. Front. Plant Sci, 8, 51.
Abstract: Successive single day transfers of pot-grown wheat to high temperature (35/30°C day/night) replicated controlled environments, from the second node detectable to the milky-ripe growth stages, provides the strongest available evidence that the fertility of wheat can be highly vulnerable to heat stress during two discrete peak periods of susceptibility: early booting [decimal growth stage (GS) 41-45] and early anthesis (GS 61-65). A double Gaussian fitted simultaneously to grain number and weight data from two contrasting elite lines (Renesansa, listed in Serbia, Ppd-D1a, Rht8; Savannah, listed in UK, Ppd-D1b, Rht-D1b) identified peak periods of main stem susceptibility centered on 3 (s.e. = 0.82) and 18 (s.e. = 0.55) days (mean daily temperature = 14.3°C) pre-GS 65 for both cultivars. Severity of effect depended on genotype, growth stage and their interaction: grain set relative to that achieved at 20/15°C dropped below 80% for Savannah at booting and Renesansa at anthesis. Savannah was relatively tolerant to heat stress at anthesis. A further experiment including 62 lines of the mapping, doubled-haploid progeny of Renesansa × Savannah found tolerance at anthesis to be associated with Ppd-D1b, Rht-D1b, and a QTL from Renesansa on chromosome 2A. None of the relevant markers were associated with tolerance during booting. Rht8 was never associated with heat stress tolerance, a lack of effect confirmed in a further experiment where Rht8 was included in a comparison of near isogenic lines in a cv. Paragon background. Some compensatory increases in mean grain weight were observed, but only when stress was applied during booting and only where Ppd-D1a was absent.
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