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Author Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F.
Title Bayesian methods for predicting LAI and soil water content Type Journal Article
Year 2014 Publication Precision Agriculture Abbreviated Journal Precision Agric.
Volume 15 Issue 2 Pages 184-201
Keywords crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state
Abstract LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.
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Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1385-2256 ISBN Medium Article
Area Expedition Conference
Notes (up) CropM, ftnotmacsur Approved no
Call Number MA @ admin @ Serial 4629
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Author Angulo, C.; Rötter, R.; Trnka, M.; Pirttioja, N.; Gaiser, T.; Hlavinka, P.; Ewert, F.
Title Characteristic ‘fingerprints’ of crop model responses to weather input data at different spatial resolutions Type Journal Article
Year 2013 Publication European Journal of Agronomy Abbreviated Journal European Journal of Agronomy
Volume 49 Issue Pages 104-114
Keywords crop model; weather data resolution; aggregation; yield distribution; climate-change scenarios; areal unit problem; simulation-model; winter-wheat; system model; impacts; europe; yield; productivity; precipitation
Abstract Crop growth simulation models are increasingly used for regionally assessing the effects of climate change and variability on crop yields. These models require spatially and temporally detailed, location-specific, environmental (weather and soil) and management data as inputs, which are often difficult to obtain consistently for larger regions. Aggregating the resolution of input data for crop model applications may increase the uncertainty of simulations to an extent that is not well understood. The present study aims to systematically analyse the effect of changes in the spatial resolution of weather input data on yields simulated by four crop models (LINTUL-SLIM, DSSAT-CSM, EPIC and WOFOST) which were utilized to test possible interactions between weather input data resolution and specific modelling approaches representing different degrees of complexity. The models were applied to simulate grain yield of spring barley in Finland for 12 years between 1994 and 2005 considering five spatial resolutions of daily weather data: weather station (point) and grid-based interpolated data at resolutions of 10 km x 10 km; 20 km x 20 km; 50 km x 50 km and 100 km x 100 km. Our results show that the differences between models were larger than the effect of the chosen spatial resolution of weather data for the considered years and region. When displaying model results graphically, each model exhibits a characteristic ‘fingerprint’ of simulated yield frequency distributions. These characteristic distributions in response to the inter-annual weather variability were independent of the spatial resolution of weather input data. Using one model (LINTUL-SLIM), we analysed how the aggregation strategy, i.e. aggregating model input versus model output data, influences the simulated yield frequency distribution. Results show that aggregating weather data has a smaller effect on the yield distribution than aggregating simulated yields which causes a deformation of the model fingerprint. We conclude that changes in the spatial resolution of weather input data introduce less uncertainty to the simulations than the use of different crop models but that more evaluation is required for other regions with a higher spatial heterogeneity in weather conditions, and for other input data related to soil and crop management to substantiate our findings. Our results provide further evidence to support other studies stressing the importance of using not just one, but different crop models in climate assessment studies. (C) 2013 Elsevier B.V. All rights reserved.
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Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1161-0301 ISBN Medium Article
Area Expedition Conference
Notes (up) CropM, ftnotmacsur Approved no
Call Number MA @ admin @ Serial 4598
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Author Rötter, R.P.; Palosuo, T.; Kersebaum, K.-C.; Angulo, C.; Bindi, M.; Ewert, F.; Ferrise, R.; Hlavinka, P.; Moriondo, M.; Olesen, J.E.; Takáč, J.; Trnka, M.
Title Simulation of spring barley yield in different climatic zones of Northern and Central Europe: A comparison of nine crop models Type Journal Article
Year 2012 Publication Field Crops Research Abbreviated Journal Field Crops Research
Volume 133 Issue Pages 23-36
Keywords Climate; Crop growth simulation; Model comparison; Spring barley; Yield variability; Uncertainty; change impacts; nitrogen dynamics; high-temperature; soil-moisture; elevated co2; ceres-wheat; data set; growth; drought; sensitivity
Abstract ► We compared nine crop simulation models for spring barley at seven sites in Europe. ► Applying crop models with restricted calibration leads to high uncertainties. ► Multi-crop model mean yield estimates were in good agreement with observations. ► The degree of uncertainty for simulated grain yield of barley was similar to winter wheat. ► We need more suitable data enabling us to verify different processes in the models. In this study, the performance of nine widely used and accessible crop growth simulation models (APES-ACE, CROPSYST, DAISY, DSSAT-CERES, FASSET, HERMES, MONICA, STICS and WOFOST) was compared during 44 growing seasons of spring barley (Hordeum vulgare L) at seven sites in Northern and Central Europe. The aims of this model comparison were to examine how different process-based crop models perform at multiple sites across Europe when applied with minimal information for model calibration of spring barley at field scale, whether individual models perform better than the multi-model mean, and what the uncertainty ranges are in simulated grain yields. The reasons for differences among the models and how results for barley compare to winter wheat are discussed. Regarding yield estimation, best performing based on the root mean square error (RMSE) were models HERMES, MONICA and WOFOST with lowest values of 1124, 1282 and 1325 (kg ha(-1)), respectively. Applying the index of agreement (IA), models WOFOST, DAISY and HERMES scored best having highest values (0.632, 0.631 and 0.585, respectively). Most models systematically underestimated yields, whereby CROPSYST showed the highest deviation as indicated by the mean bias error (MBE) (-1159 kg ha(-1)). While the wide range of simulated yields across all sites and years shows the high uncertainties in model estimates with only restricted calibration, mean predictions from the nine models agreed well with observations. Results of this paper also show that models that were more accurate in predicting phenology were not necessarily the ones better estimating grain yields. Total above-ground biomass estimates often did not follow the patterns of grain yield estimates and, thus, harvest indices were also different. Estimates of soil moisture dynamics varied greatly. In comparison, even though the growing cycle for winter wheat is several months longer than for spring barley, using RMSE and IA as indicators, models performed slightly, but not significantly, better in predicting wheat yields. Errors in reproducing crop phenology were similar, which in conjunction with the shorter growth cycle of barley has higher effects on accuracy in yield prediction.
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Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium Article
Area Expedition Conference
Notes (up) CropM, ftnotmacsur Approved no
Call Number MA @ admin @ Serial 4592
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Author Nendel, C.; Wieland, R.; Mirschel, W.; Specka, X.; Guddat, C.; Kersebaum, K.C.
Title Simulating regional winter wheat yields using input data of different spatial resolution Type Journal Article
Year 2013 Publication Field Crops Research Abbreviated Journal Field Crops Research
Volume 145 Issue Pages 67-77
Keywords monica; agro-ecosystem model; dynamic modelling; scaling; input data; climate-change; crop yield; nitrogen dynamics; food security; mineral nitrogen; soil-moisture; scaling-up; model; maize; water
Abstract The success of using agro-ecosystem models for the high-resolution simulation of agricultural yields for larger areas is often hampered by a lack of input data. We investigated the effect of different spatially resolved soil and weather data used as input for the MONICA model on its ability to reproduce winter wheat yields in the Federal State of Thuringia, Germany (16,172 km(2)). The combination of one representative soil and one weather station was insufficient to reproduce the observed mean yield of 6.66 +/- 0.87 t ha(-1) for the federal state. Use of a 100 m x 100 m grid of soil and relief information combined with just one representative weather station yielded a good estimator (7.01 +/- 1.47 t ha(-1)). The soil and relief data grid used in combination with weather information from 14 weather stations in a nearest neighbour approach produced even better results (6.60 +/- 1.37 t ha(-1)); the same grid used with 39 additional rain gauges and an interpolation algorithm that included an altitude correction of temperature data slightly overpredicted the observed mean (7.36 +/- 1.17 t ha(-1)). It was concluded that the apparent success of the first two high-resolution approaches over the latter was based on two effects that cancelled each other out: the calibration of MONICA to match high-yield experimental data and the growth-defining and -limiting effect of weather data that is not representative for large parts of the region. At the county and farm level the MONICA model failed to reproduce the 1992-2010 time series of yields, which is partly explained by the fact that many growth-reducing factors were not considered in the model. (C) 2013 Elsevier B.V. All rights reserved.
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Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0378-4290 ISBN Medium Article
Area Expedition Conference
Notes (up) CropM, ftnotmacsur Approved no
Call Number MA @ admin @ Serial 4498
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Author Nelson, G.C.; Valin, H.; Sands, R.D.; Havlík, P.; Ahammad, H.; Deryng, D.; Elliott, J.; Fujimori, S.; Hasegawa, T.; Heyhoe, E.; Kyle, P.; Von Lampe, M.; Lotze-Campen, H.; Mason d’Croz, D.; van Meijl, H.; van der Mensbrugghe, D.; Müller, C.; Popp, A.; Robertson, R.; Robinson, S.; Schmid, E.; Schmitz, C.; Tabeau, A.; Willenbockel, D.
Title Climate change effects on agriculture: economic responses to biophysical shocks Type Journal Article
Year 2014 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U. S. A.
Volume 111 Issue 9 Pages 3274-3279
Keywords Agriculture/*economics; Carbon Dioxide/analysis; *Climate Change; Commerce/statistics & numerical data; Computer Simulation; Crops, Agricultural/*growth & development; Forecasting; Humans; *Models, Economic; agricultural productivity; climate change adaptation; integrated assessment; model intercomparison
Abstract Agricultural production is sensitive to weather and thus directly affected by climate change. Plausible estimates of these climate change impacts require combined use of climate, crop, and economic models. Results from previous studies vary substantially due to differences in models, scenarios, and data. This paper is part of a collective effort to systematically integrate these three types of models. We focus on the economic component of the assessment, investigating how nine global economic models of agriculture represent endogenous responses to seven standardized climate change scenarios produced by two climate and five crop models. These responses include adjustments in yields, area, consumption, and international trade. We apply biophysical shocks derived from the Intergovernmental Panel on Climate Change’s representative concentration pathway with end-of-century radiative forcing of 8.5 W/m(2). The mean biophysical yield effect with no incremental CO2 fertilization is a 17% reduction globally by 2050 relative to a scenario with unchanging climate. Endogenous economic responses reduce yield loss to 11%, increase area of major crops by 11%, and reduce consumption by 3%. Agricultural production, cropland area, trade, and prices show the greatest degree of variability in response to climate change, and consumption the lowest. The sources of these differences include model structure and specification; in particular, model assumptions about ease of land use conversion, intensification, and trade. This study identifies where models disagree on the relative responses to climate shocks and highlights research activities needed to improve the representation of agricultural adaptation responses to climate change.
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Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0027-8424 1091-6490 ISBN Medium Article
Area Expedition Conference
Notes (up) CropM, TradeM, ft_macsur Approved no
Call Number MA @ admin @ Serial 4535
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