| Records |
| Author |
Martre, P.; He, J.; Le Gouis, J.; Semenov, M.A. |
| Title |
In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management |
Type |
Journal Article |
| Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
| Volume |
66 |
Issue |
12 |
Pages |
3581-3598 |
| Keywords |
Climate; *Computer Simulation; Crops, Agricultural/*growth & development/physiology; Edible Grain/*growth & development; Models, Biological; Nitrogen/metabolism; Plant Proteins/*metabolism; Plant Transpiration; Probability; *Quantitative Trait, Heritable; Soil/chemistry; Triticum/growth & development/metabolism/*physiology; Water/chemistry; Crop growth model; genetic adaptation; grain protein concentration; grain yield; interannual variability; sensitivity analysis; wheat (Triticum aestivum L.); yield stability |
| Abstract |
Genetic improvement of grain yield (GY) and grain protein concentration (GPC) is impeded by large genotype×environment×management interactions and by compensatory effects between traits. Here global uncertainty and sensitivity analyses of the process-based wheat model SiriusQuality2 were conducted with the aim of identifying candidate traits to increase GY and GPC. Three contrasted European sites were selected and simulations were performed using long-term weather data and two nitrogen (N) treatments in order to quantify the effect of parameter uncertainty on GY and GPC under variable environments. The overall influence of all 75 plant parameters of SiriusQuality2 was first analysed using the Morris method. Forty-one influential parameters were identified and their individual (first-order) and total effects on the model outputs were investigated using the extended Fourier amplitude sensitivity test. The overall effect of the parameters was dominated by their interactions with other parameters. Under high N supply, a few influential parameters with respect to GY were identified (e.g. radiation use efficiency, potential duration of grain filling, and phyllochron). However, under low N, >10 parameters showed similar effects on GY and GPC. All parameters had opposite effects on GY and GPC, but leaf and stem N storage capacity appeared as good candidate traits to change the intercept of the negative relationship between GY and GPC. This study provides a system analysis of traits determining GY and GPC under variable environments and delivers valuable information to prioritize model development and experimental work. |
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English |
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1460-2431 (Electronic) 0022-0957 (Linking) |
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CropM, ftnotmacsur |
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no |
| Call Number |
MA @ admin @ |
Serial |
4567 |
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| Author |
Semenov, M.A.; Mitchell, R.A.C.; Whitmore, A.P.; Hawkesford, M.J.; Parry, M.A.J.; Shewry, P.R. |
| Title |
Shortcomings in wheat yield predictions |
Type |
Journal Article |
| Year |
2012 |
Publication |
Nature Climate Change |
Abbreviated Journal |
Nat. Clim. Change |
| Volume |
2 |
Issue |
6 |
Pages |
380-382 |
| Keywords |
winter-wheat; elevated CO2; temperature; growth |
| Abstract |
Predictions of a 40–140% increase in wheat yield by 2050, reported in the UK Climate Change Risk Assessment, are based on a simplistic approach that ignores key factors affecting yields and hence are seriously misleading. |
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English |
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1758-678x 1758-6798 |
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Commentary |
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CropM, ftnotmacsur |
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no |
| Call Number |
MA @ admin @ |
Serial |
4504 |
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| Author |
Dono, G.; Cortignani, R.; Doro, L.; Giraldo, L.; Ledda, L.; Pasqui, M.; Roggero, P.P. |
| Title |
Adapting to uncertainty associated with short-term climate variability changes in irrigated Mediterranean farming systems |
Type |
Journal Article |
| Year |
2013 |
Publication |
Agricultural Systems |
Abbreviated Journal |
Agricultural Systems |
| Volume |
117 |
Issue |
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Pages |
1-12 |
| Keywords |
changed climate variability; dsp; epic; adaptation; water management; irrigation; simulating impacts; co2 concentration; crop production; productivity; maize; yield; growth; model; photosynthesis; agriculture |
| Abstract |
Short-term perspectives appear to be relevant in formulating adaptation measures to changed climate variability (CCV) as a part of the European Rural Development Policy (RDP). Indeed, short-run CCV is the variation that farmers would perceive to such an extent that a political demand would be generated for adapting support measures. This study evaluates some relevant agronomic and economic impacts of CCV as modelled in a near future time period at the catchment scale in a rural district in Sardinia (Italy). The effects of CCV are assessed in relation to the availability of irrigation water and the irrigation needs of maize. The Environmental Policy Integrated Climate (EPIC) model was used to simulate the impact of key climatic variables on the irrigation water requirements and yields of maize. A three-stage discrete stochastic programming model was then applied to simulate management and economic responses to those changes. The overall economic impact of a simulated CCV was found to be primarily caused by reduced stability in the future supply of irrigation water. Adaptations to this instability will most likely lead to a higher level of groundwater extraction and a reduction in the demand for labour. Changed climate variability will most likely reduce the income potential of small-scale farming. The most CCV-vulnerable farm typologies were identified, and the implications were discussed in relation to the development of adaptation measures within the context of the Common Agricultural Policy of European Union. (C) 2013 Elsevier Ltd. All rights reserved. |
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0308521x |
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CropM, ftnotmacsur |
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no |
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MA @ admin @ |
Serial |
4489 |
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| Author |
Van Oijen, M.; Höglind, M. |
| Title |
Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design |
Type |
Journal Article |
| Year |
2016 |
Publication |
Euphytica |
Abbreviated Journal |
Euphytica |
| Volume |
207 |
Issue |
3 |
Pages |
627-643 |
| Keywords |
BASGRA; cold tolerance; genotype-environment interaction; plant breeding; process-based modelling; yield stability; grassland productivity; timothy regrowth; climate-change; water-deficit; forest models; late blight; leaf-area; calibration; growth; tolerance |
| Abstract |
Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway. |
| Address |
2016-10-31 |
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English |
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| ISSN |
0014-2336 |
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Article |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4820 |
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| Author |
Rötter, R.P.; Tao, F.; Höhn, J.G.; Palosuo, T. |
| Title |
Use of crop simulation modelling to aid ideotype design of future cereal cultivars |
Type |
Journal Article |
| Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
| Volume |
66 |
Issue |
12 |
Pages |
3463-3476 |
| Keywords |
Breeding/*methods; Climate Change; *Computer Simulation; Ecotype; Edible Grain/*growth & development; *Models, Theoretical; cereals; climate extremes; crop growth simulation; ensemble modelling; future cultivars; genetic modelling; ideotype breeding; model improvement; model-aided design |
| Abstract |
A major challenge of the 21st century is to achieve food supply security under a changing climate and roughly a doubling in food demand by 2050 compared to present, the majority of which needs to be met by the cereals wheat, rice, maize, and barley. Future harvests are expected to be especially threatened through increased frequency and severity of extreme events, such as heat waves and drought, that pose particular challenges to plant breeders and crop scientists. Process-based crop models developed for simulating interactions between genotype, environment, and management are widely applied to assess impacts of environmental change on crop yield potentials, phenology, water use, etc. During the last decades, crop simulation has become important for supporting plant breeding, in particular in designing ideotypes, i.e. ‘model plants’, for different crops and cultivation environments. In this review we (i) examine the main limitations of crop simulation modelling for supporting ideotype breeding, (ii) describe developments in cultivar traits in response to climate variations, and (iii) present examples of how crop simulation has supported evaluation and design of cereal cultivars for future conditions. An early success story for rice demonstrates the potential of crop simulation modelling for ideotype breeding. Combining conventional crop simulation with new breeding methods and genetic modelling holds promise to accelerate delivery of future cereal cultivars for different environments. Robustness of model-aided ideotype design can further be enhanced through continued improvements of simulation models to better capture effects of extremes and the use of multi-model ensembles. |
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2016-10-31 |
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English |
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Edition |
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| ISSN |
0022-0957 1460-2431 |
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Review |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4804 |
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