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Korhonen, P., Palosuo, T., Höglind, M., Persson, T., van Oijen, M., Jego, G., et al. (2016). Intercomparison of models for simulating timothy yield in Northern countries. The multiple roles of grassland in the European bioeconomy. General Meeting of the European Grassland Federation, 26. Trondheim, Norway.
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Van Oijen, M., & Höglind, M. (2016). Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design. Euphytica, 207(3), 627–643.
Abstract: Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway.
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Persson, T., Kværnø, S., & Höglind, M. (2015). Impact of soil type extrapolation on timothy grass yield under baseline and future climate conditions in southeastern Norway. Clim. Res., 65, 71–86.
Abstract: Interactions between soil properties and climate affect forage grass productivity. Dynamic models, simulating crop performance as a function of environmental conditions, are valid for a specific location with given soil and weather conditions. Extrapolations of local soil properties to larger regions can help assess the requirement for soil input in regional yield estimations. Using the LINGRA model, we simulated the regional yield level and variability of timothy, a forage grass, in Akershus and Ostfold counties, Norway. Soils were grouped according to physical similarities according to 4 sets of criteria. This resulted in 66, 15, 5 and 1 groups of soils. The properties of the soil with the largest area was extrapolated to the other soils within each group and input to the simulations. All analyses were conducted for 100 yr of generated weather representing the period 1961-1990, and climate projections for the period 2046-2065, the Intergovernmental Panel on Climate Change greenhouse gas emission scenario A1B, and 4 global climate models. The simulated regional seasonal timothy yields were 5-13% lower on average and had higher inter-annual variability for the least detailed soil extrapolation than for the other soil extrapolations, across climates. There were up to 20% spatial intra-regional differences in simulated yield between soil extrapolations. The results indicate that, for conditions similar to these studied here, a few representative profiles are sufficient for simulations of average regional seasonal timothy yield. More spatially detailed yield analyses would benefit from more detailed soil input.
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Persson, T., Höglind, M., Gustavsson, A. - M., Halling, M., Jauhiainen, L., Niemeläinen, O., et al. (2014). Evaluation of the LINGRA timothy model under Nordic conditions. Field Crops Research, 161, 87–97.
Abstract: Simulation models are frequently applied to determine the production potential of forage grasses under various scenarios, including climate change. Thorough calibrations and evaluations of forage grass models can help improve their applicability. This study evaluated the ability of the Light Interception and Utilization Simulator-GRAss (LINGRA) model to predict biomass yield of timothy (Phleum pratense L. cv. Grindstad) in the Nordic countries. Variety trial data for the first and second year after establishment were obtained for seven locations: Jokioinen, Finland (60 degrees 48 ‘ N; 23 degrees 29 ‘ E), Maaninka, Finland (63 degrees 09 ‘ N; 27 degrees 18 ‘ E), Korpa, Iceland (64 degrees 09 ‘ N; 21 degrees 45 ‘ W), Srheim, Norway (58 degrees 41 ‘ N; 5 degrees 39 ‘ E), Lillerud, Sweden (59 degrees 24’ N; 13 degrees 16 ‘ E), Ostersund, Sweden (63 degrees 15 ‘ N; 14 degrees 34 ‘ E) and Ulna Sweden (63 degrees 49 ‘ N; 20 degrees 13 ‘ E) from 1992 to 2012. Two calibrations of the LINGRA model were carried out using Bayesian techniques. In the first of these (SRrheim calibration), data on biomass yield and underlying variables obtained from independent field trials at Srheim were used. In the second (Nordic calibration), biomass data from the other locations were used as well. The model was validated against the remaining set of biomass yields from all locations not included in the Nordic calibration. The observed total seasonal yield the first and second year after establishment was 913 and 991 g DM m(-2) respectively on average across the locations. The corresponding average simulated yield after the Srheim calibration was 1044 (root mean square error (RMSE) 258) and 1112 g DM m(-2) (RMSE 312), respectively. After the Nordic calibration, the simulated average total seasonal yield was 863 (RMSE 242) the first year and 927 g DM m(-2) (RMSE 271) the second year after establishment. The differences between the observed and simulated first cut yield followed the same patterns, whereas the prediction accuracy for second cut yield did not differ substantially between the calibration approaches.Using the parameter set from the Nordic region decreased the model predictability at Srheim compared with only using model parameters derived from this location. These results show that using biomass data from several locations, instead of only one specific location, in the calibration of the LINGRA model improved the overall prediction accuracy of first cut dry matter yield and total seasonal dry matter yield across an environmentally heterogeneous region. To further analyse the usefulness of including multi-site data in forage grass model calibrations, other forage grass models could be evaluated against the same dataset.
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Korhonen, P., Palosuo, T., Persson, T., Höglind, M., Jego, G., Van Oijen, M., et al. (2018). Modelling grass yields in northern climates – a comparison of three growth models for timothy. Field Crops Research, 224, 37–47.
Abstract: During the past few years, several studies have compared the performance of crop simulation models to assess the uncertainties in model-based climate change impact assessments and other modelling studies. Many of these studies have concentrated on cereal crops, while fewer model comparisons have been conducted for grasses. We compared the predictions for timothy grass (Phleum pratertse L.) yields for first and second cuts along with the dynamics of above-ground biomass for the grass simulation models BASGRA and CATIMO, and the soil -crop model STICS. The models were calibrated and evaluated using field data from seven sites across Northern Europe and Canada with different climates, soil conditions and management practices. Altogether the models were compared using data on timothy grass from 33 combinations of sites, cultivars and management regimes. Model performances with two calibration approaches, cultivar-specific and generic calibrations, were compared. All the models studied estimated the dynamics of above-ground biomass and the leaf area index satisfactorily, but tended to underestimate the first cut yield. Cultivar-specific calibration resulted in more accurate first cut yield predictions than the generic calibration achieving root mean square errors approximately one third lower for the cultivar-specific calibration. For the second cut, the difference between the calibration methods was small. The results indicate that detailed soil process descriptions improved the overall model performance and the model responses to management, such as nitrogen applications. The results also suggest that taking the genetic variability into account between cultivars of timothy grass also improves the yield estimates. Calibrations using both spring and summer growth data simultaneously revealed that processes determining the growth in these two periods require further attention in model development.
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