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Wallach, D.; Nissanka, S.P.; Karunaratne, A.S.; Weerakoon, W.M.W.; Thorburn, P.J.; Boote, K.J.; Jones, J.W. |
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Accounting for both parameter and model structure uncertainty in crop model predictions of phenology: A case study on rice |
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Journal Article |
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Year |
2016 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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Uncertainty; Phenology; Parameter uncertainty; Multi-model ensemble; Generalized least squares; Rice; Crop model; APSIM; DSSAT |
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Abstract |
We consider predictions of the impact of climate warming on rice development times in Sri Lanka. The major emphasis is on the uncertainty of the predictions, and in particular on the estimation of mean squared error of prediction. Three contributions to mean squared error are considered. The first is parameter uncertainty that results from model calibration. To take proper account of the complex data structure, generalized least squares is used to estimate the parameters and the variance-covariance matrix of the parameter estimators. The second contribution is model structure uncertainty, which we estimate using two different models. An ANOVA analysis is used to separate the contributions of parameter and model uncertainty to mean squared error. The third contribution is model error, which is estimated using hindcasts. Mean squared error of prediction of time from emergence to maturity, for baseline +2 °C, is estimated as 108 days2, with model error contributing 86 days2, followed by model structure uncertainty which contributes 15 days2 and parameter uncertainty which contributes 7 days2. We also show how prediction uncertainty is reduced if prediction concerns development time averaged over years, or the difference in development time between baseline and warmer temperatures. |
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2016-09-13 |
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1161-0301 |
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CropM |
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CropM; wos; ftnotmacsur; wsnotyet; |
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no |
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MA @ admin @ |
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4777 |
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Author |
Mueller, L.; Schindler, U.; Shepherd, T.G.; Ball, B.C.; Smolentseva, E.; Hu, C.; Hennings, V.; Schad, P.; Rogasik, J.; Zeitz, J.; Schlindwein, S.L.; Behrendt, A.; Helming, K.; Eulenstein, F. |
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Title |
A framework for assessing agricultural soil quality on a global scale |
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Journal Article |
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Year |
2012 |
Publication |
Archives of Agronomy and Soil Science |
Abbreviated Journal |
Archives of Agronomy and Soil Science |
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58 |
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sup1 |
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S76-S82 |
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Keywords |
soil quality; indicators; muencheberg soil quality rating |
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This paper provides information about a novel approach of rating agricultural soil quality (SQ) and crop yield potentials consistently over a range of spatial scales. The Muencheberg Soil Quality Rating is an indicator-based straightforward overall assessment method of agricultural SQ. It is a framework covering aspects of soil texture, structure, topography and climate which is based on 8 basic indicators and more than 12 hazard indicators. Ratings are performed by visual methods of soil evaluation. A field manual is then used to provide ratings from tables based on indicator thresholds. Finally, overall rating scores are given, ranging from 0 (worst) to 100 (best) to characterise crop yield potentials. The current approach is valid for grassland and cropland. Field tests in several countries confirmed the practicability and reliability of the method. At field scale, soil structure is a crucial, management induced criterion of agricultural SQ. At the global scale, climate controlled hazard indicators of drought risk and soil thermal regime are crucial for SQ and crop yield potentials. Final rating scores are well correlated with crop yields. We conclude that this system could be evolved for ranking and controlling agricultural SQ on a global scale. |
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0365-0340 |
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CropM, TradeM, ftnotmacsur |
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MA @ admin @ |
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4589 |
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Jing, Q.; Bélanger, G.; Baron, V.; Bonesmo, H.; Virkajärvi, P. |
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Title |
Simulating the Nutritive Value of Timothy Summer Regrowth |
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Journal Article |
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Year |
2013 |
Publication |
Agronomy Journal |
Abbreviated Journal |
Agronomy Journal |
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105 |
Issue |
3 |
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563 |
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varying n nutrition; cation-anion difference; spring growth; swine manure; leaf-area; nitrogen; yield; model; digestibility; dynamics |
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The process-based grass model, CATIMO, simulates the spring growth and nutritive value of timothy (Phleum pratense L.), a forage species widely grown in Scandinavia and Canada, but the nutritive value of the summer regrowth has never been simulated. Our objective was to improve CATIMO for simulating the N concentration, neutral detergent fiber (NDF), in vitro digestibility of NDF (dNDF), and in vitro true digestibility of dry matter (IVTD) of summer regrowth. Daily changes in summer regrowth nutritive value were simulated by modifying key crop parameters that differed from spring growth. More specifically, the partitioning fraction to leaf blades was increased to increase the leaf-to-weight ratio, and daily changes in NDF and dNDF of leaf blades and stems were reduced. The modified CATIMO model was evaluated with data from four independent experiments in eastern and western Canada and Finland. The model performed better for eastern Canada than for the other locations, but the nutritive value attributes of the summer regrowth across locations (range of normalized RMSE = 8-25%, slope < 0.17, R-2 < 0.10) were not simulated as well as those of the spring growth (range of normalized RMSE = 4-16%, 0.85 < slope < 1.07, R-2 > 0.61). These modeling results highlight knowledge gaps in timothy summer regrowth and prospective research directions: improved knowledge of factors controlling the nutritive value of the timothy summer regrowth and experimental measurements of leaf-to-weight ratio and of the nutritive value of leaves and stems. |
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0002-1962 |
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CropM, LiveM |
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MA @ admin @ |
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4493 |
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Toscano, P.; Ranieri, R.; Matese, A.; Vaccari, F.P.; Gioli, B.; Zaldei, A.; Silvestri, M.; Ronchi, C.; La Cava, P.; Porter, J.R.; Miglietta, F. |
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Durum wheat modeling: The Delphi system, 11 years of observations in Italy |
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Journal Article |
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2012 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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43 |
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108-118 |
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durum wheat; crop modeling; yield forecasting; calibration; scenarios; decision-support-system; crop simulation-model; ceres-wheat; mediterranean environment; winter-wheat; scaling-up; variability; quality; growth; water |
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► Delphi system, based on AFRCWHEAT2 model, for durum wheat forecast. ► AFRCWHEAT2 model was calibrated and validated for three years. ► A scenario approach was applied to simulation of durum wheat yield. ► Operational mode for eleven years in rainfed and water limiting conditions. ► Accurate forecast as an useful planning tool. Crop models are frequently used in ecology, agronomy and environmental sciences for simulating crop and environmental variables at a discrete time step. The aim of this work was to test the predictive capacity of the Delphi system, calibrated and determined for each pedoclimatic factor affecting durum wheat during phenological development. at regional scale. We present an innovative system capable of predicting spatial yield variation and temporal yield fluctuation in long-term analysis, that are the main purposes of regional crop simulation study. The Delphi system was applied to simulate growth and yield of durum wheat in the major Italian supply basins (Basilicata, Capitanata, Marche, Tuscany). The model was validated and evaluated for three years (1995-1997) at 11 experimental fields and then used in operational mode for eleven years (1999-2009), showing an excellent/good accuracy in predicting grain yield even before maturity for a wide range of growing conditions in the Mediterranean climate, governed by different annual weather patterns. The results were evaluated on the basis of regression and normalized root mean squared error with known crop yield statistics at regional level. (c) 2012 Elsevier B.V. All rights reserved. |
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1161-0301 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4596 |
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Angulo, C.; Rötter, R.; Trnka, M.; Pirttioja, N.; Gaiser, T.; Hlavinka, P.; Ewert, F. |
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Characteristic ‘fingerprints’ of crop model responses to weather input data at different spatial resolutions |
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Journal Article |
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2013 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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49 |
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104-114 |
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crop model; weather data resolution; aggregation; yield distribution; climate-change scenarios; areal unit problem; simulation-model; winter-wheat; system model; impacts; europe; yield; productivity; precipitation |
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Crop growth simulation models are increasingly used for regionally assessing the effects of climate change and variability on crop yields. These models require spatially and temporally detailed, location-specific, environmental (weather and soil) and management data as inputs, which are often difficult to obtain consistently for larger regions. Aggregating the resolution of input data for crop model applications may increase the uncertainty of simulations to an extent that is not well understood. The present study aims to systematically analyse the effect of changes in the spatial resolution of weather input data on yields simulated by four crop models (LINTUL-SLIM, DSSAT-CSM, EPIC and WOFOST) which were utilized to test possible interactions between weather input data resolution and specific modelling approaches representing different degrees of complexity. The models were applied to simulate grain yield of spring barley in Finland for 12 years between 1994 and 2005 considering five spatial resolutions of daily weather data: weather station (point) and grid-based interpolated data at resolutions of 10 km x 10 km; 20 km x 20 km; 50 km x 50 km and 100 km x 100 km. Our results show that the differences between models were larger than the effect of the chosen spatial resolution of weather data for the considered years and region. When displaying model results graphically, each model exhibits a characteristic ‘fingerprint’ of simulated yield frequency distributions. These characteristic distributions in response to the inter-annual weather variability were independent of the spatial resolution of weather input data. Using one model (LINTUL-SLIM), we analysed how the aggregation strategy, i.e. aggregating model input versus model output data, influences the simulated yield frequency distribution. Results show that aggregating weather data has a smaller effect on the yield distribution than aggregating simulated yields which causes a deformation of the model fingerprint. We conclude that changes in the spatial resolution of weather input data introduce less uncertainty to the simulations than the use of different crop models but that more evaluation is required for other regions with a higher spatial heterogeneity in weather conditions, and for other input data related to soil and crop management to substantiate our findings. Our results provide further evidence to support other studies stressing the importance of using not just one, but different crop models in climate assessment studies. (C) 2013 Elsevier B.V. All rights reserved. |
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1161-0301 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4598 |
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