De Swaef, T., Bellocchi, G., Aper, J., Lootens, P., & Roldan-Ruiz, I. (2019). Use of identifiability analysis in designing phenotyping experiments for modelling forage production and quality. J. Experim. Bot., 70(9), 2587–2604.
Abstract: Agricultural systems models are complex and tend to be over-parameterized with respect to observational datasets. Practical identifiability analysis based on local sensitivity analysis has proved effective in investigating identifiable parameter sets in environmental models, but has not been applied to agricultural systems models. Here, we demonstrate that identifiability analysis improves experimental design to ensure independent parameter estimation for yield and quality outputs of a complex grassland model. The Pasture Simulation model (PaSim) was used to demonstrate the effectiveness of practical identifiability analysis in designing experiments and measurement protocols within phe-notyping experiments with perennial ryegrass. Virtual experiments were designed combining three factors: frequency of measurements, duration of the experiment. and location of trials. Our results demonstrate that (i) PaSim provides sufficient detail in terms of simulating biomass yield and quality of perennial ryegrass for use in breeding, (ii) typical breeding trials are insufficient to parameterize all influential parameters, (iii) the frequency of measurements is more important than the number of growing seasons to improve the identifiability of PaSim parameters, and (iv) identifiability analysis provides a sound approach for optimizing the design of multi-location trials. Practical identifiability analysis can play an important role in ensuring proper exploitation of phenotypic data and cost-effective multi-location experimental designs. Considering the growing importance of simulation models, this study supports the design of experiments and measurement protocols in the phenotyping networks that have recently been organized.
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Tao, F., Palosuo, T., Roetter, R. P., Hernandez Diaz-Ambrona, C. G., Ines Minguez, M., Semenov, M. A., et al. (2020). Why do crop models diverge substantially in climate impact projections? A comprehensive analysis based on eight barley crop models. Agricultural and Forest Meteorology, 281, 107851.
Abstract: Robust projections of climate impact on crop growth and productivity by crop models are key to designing effective adaptations to cope with future climate risk. However, current crop models diverge strongly in their climate impact projections. Previous studies tried to compare or improve crop models regarding the impact of one single climate variable. However, this approach is insufficient, considering that crop growth and yield are affected by the interactive impacts of multiple climate change factors and multiple interrelated biophysical processes. Here, a new comprehensive analysis was conducted to look holistically at the reasons why crop models diverge substantially in climate impact projections and to investigate which biophysical processes and knowledge gaps are key factors affecting this uncertainty and should be given the highest priorities for improvement. First, eight barley models and eight climate projections for the 2050s were applied to investigate the uncertainty from crop model structure in climate impact projections for barley growth and yield at two sites: Jokioinen, Finland (Boreal) and Lleida, Spain (Mediterranean). Sensitivity analyses were then conducted on the responses of major crop processes to major climatic variables including temperature, precipitation, irradiation, and CO2, as well as their interactions, for each of the eight crop models. The results showed that the temperature and CO2 relationships in the models were the major sources of the large discrepancies among the models in climate impact projections. In particular, the impacts of increases in temperature and CO2 on leaf area development were identified as the major causes for the large uncertainty in simulating changes in evapotranspiration, above-ground biomass, and grain yield. Our findings highlight that advancements in understanding the basic processes and thresholds by which climate warming and CO2 increases will affect leaf area development, crop evapotranspiration, photosynthesis, and grain formation in contrasting environments are needed for modeling their impacts.
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Kersebaum, K. - C., Wallor, E., Ventrella, D., Cammarano, D., Choucheney, E., Ewert, F., et al. (2017). Comparison of site sensitivity of crop models using spatially variable field data from Precision Agriculture (Vol. 10).
Abstract: Site conditions and soil properties have a strong influence on impacts of climate change on crop production. Vulnerability of crop production to changing climate conditions is highly determined by the ability of the site to buffer periods of adverse climatic situations like water scarcity or excessive rainfall. Therefore, the capability of models to reflect crop responses and water and nutrient dynamics under different site conditions is essential to assess climate impact even on a regional scale. To test and improve sensitivity of models to various site properties such as soil variability and hydrological boundary conditions, spatial variable data sets from precision farming of two fields in Germany and Italy were provided to modellers. For the German 20 ha field soil and management data for 60 grid points for 3 years (2 years wheat, 1 year triticale) were provided. For the Italian field (12 ha) information for 100 grid points were available for three growing seasons of durum wheat. Modellers were asked to run their models using a) the model specific procedure to estimate soil hydraulic properties from texture using their standard procedure and use in step b) fixed values for field capacity and wilting point derived from soil taxonomy. Only the phenology and crop yield of one grid point provided for a basic calibration. In step c) information for all grid points of the first year (yield, soil water and mineral N content for Germany, yield, biomass and LAI for Italy) were provided. First results of five out of twelve participating models are compared against measured state variables analysing their site specific response and consistency across crop and soil variables. (Main text to be published in a peer-reviewed journal)
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Sándor, R., Ehrhardt, F., Basso, B., Bellocchi, G., Bhatia, A., Brilli, L., et al. (2016). C and N models Intercomparison – benchmark and ensemble model estimates for grassland production. Advances in Animal Biosciences, 7(03), 245–247.
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Cammarano, D., Rötter, P., Ewert, F., Palosuo, T., Bindi, M., Kersebaum, K. C., et al. (2013). Challenges for Agro-Ecosystem Modelling in Climate Change Risk Assessment for major European Crops and Farming systems. (pp. 555–564).
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