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Ramirez-Villegas, J., Watson, J., & Challinor, A. J. (2015). Identifying traits for genotypic adaptation using crop models. J. Experim. Bot., 66(12), 3451–3462.
Abstract: Genotypic adaptation involves the incorporation of novel traits in crop varieties so as to enhance food productivity and stability and is expected to be one of the most important adaptation strategies to future climate change. Simulation modelling can provide the basis for evaluating the biophysical potential of crop traits for genotypic adaptation. This review focuses on the use of models for assessing the potential benefits of genotypic adaptation as a response strategy to projected climate change impacts. Some key crop responses to the environment, as well as the role of models and model ensembles for assessing impacts and adaptation, are first reviewed. Next, the review describes crop-climate models can help focus the development of future-adapted crop germplasm in breeding programmes. While recently published modelling studies have demonstrated the potential of genotypic adaptation strategies and ideotype design, it is argued that, for model-based studies of genotypic adaptation to be used in crop breeding, it is critical that modelled traits are better grounded in genetic and physiological knowledge. To this aim, two main goals need to be pursued in future studies: (i) a better understanding of plant processes that limit productivity under future climate change; and (ii) a coupling between genetic and crop growth models-perhaps at the expense of the number of traits analysed. Importantly, the latter may imply additional complexity (and likely uncertainty) in crop modelling studies. Hence, appropriately constraining processes and parameters in models and a shift from simply quantifying uncertainty to actually quantifying robustness towards modelling choices are two key aspects that need to be included into future crop model-based analyses of genotypic adaptation.
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Mansouri, M., Dumont, B., Leemans, V., & Destain, M. - F. (2014). Bayesian methods for predicting LAI and soil water content. Precision Agric., 15(2), 184–201.
Abstract: LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.
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Montesino-San Martín, M., Olesen, J. E., & Porter, J. R. (2014). A genotype, environment and management (GxExM) analysis of adaptation in winter wheat to climate change in Denmark. Agricultural and Forest Meteorology, 187, 1–13.
Abstract: Wheat yields in Europe have shown stagnating trends during the last two decades, partly attributed to climate change. Such developments challenge the needs for increased production, in particular at higher latitudes, to meet increasing global demands and expected productivity reductions at lower latitudes. Climate change projections from three General Circulation Models or GCMs (UKMO-HadGEM1, INM-GM3.0 and CSIRO-Mk3.1) for the A1FI SIZES emission scenario for 2000 to 2100 were downscaled at a northern latitude location (Foulum, Denmark) using LARS-WG5.3. The scenarios accounted for changes in temperature, precipitation and atmospheric CO2 concentration. In addition, three temperature-variability scenarios were included assuming different levels of decreased temperature variability in winter and increased in summer. Crop yield was simulated for the different climate change scenarios by a calibrated version of AFRCWHEAT2 to model several combinations of genotypes (varying in crop growth, development and tolerance to water and nitrogen scarcity) and management (sowing dates and nitrogen fertilization rate). The simulations showed a slight improvement of grain yields (0.3-1.2 Mg ha(-1)) in the medium-term (2030-2050), but not enough to cope with expected increases in demand for food and feed. Optimum management added up to 1.8 Mg ha(-1). Genetic modifications regarding winter wheat crop development exhibit the greatest sensitivity to climate and larger potential for improvement (+3.8 Mg ha(-1)). The results consistently points towards need for cultivars with a longer reproductive phases (2.9-7.5% per 1 degrees C) and lower photoperiod sensitivities. Due to the positive synergies between several genotypic characteristics, multiple-target breeding programmes would be necessary, possibly assisted by model-based assessments of optimal phenotypic characteristics.
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Nendel, C., Kersebaum, K. C., Mirschel, W., & Wenkel, K. O. (2014). Testing farm management options as climate change adaptation strategies using the MONICA model. European Journal of Agronomy, 52, 47–56.
Abstract: Adaptation of agriculture to climate change will be driven at the farm level in first place. The MONICA model was employed in four different modelling exercises for demonstration and testing different management options for farmers in Germany to adjust their production system. 30-Year simulations were run for the periods 1996-2025 and 2056-2085 using future climate data generated by a statistical method on the basis of measured data from 1961 to 2000 and the A1B scenario of the IPCC (2007a). Crop rotation designs that are expected to become possible in the future due to a prolonged vegetation period and at the same time shortened cereal growth period were tested for their likely success. The model suggested that a spring barley succeeding a winter barley may be successfully grown in the second half of the century, allowing for a larger yields by intensification of the cropping cycle. Growing a winter wheat after a sugar beet may lead to future problems as late sowing makes the winter wheat grow into periods prone to drought. Irrigation is projected to considerably improve and stabilise the yields of late cereals and of shallow rooting crops (maize and pea) on sandy soils in the continental climate part of Germany, but not in the humid West. Nitrogen fertiliser management needs to be adjusted to increasing or decreasing yield expectations and for decreasing soil moisture. On soils containing sufficient amounts of Moisture and soil organic matter, enhanced mineralisation is expected to compensate for a greater N demand. (C) 2012 Elsevier B.V. All rights reserved.
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Humpenöder, F., Popp, A., Dietrich, J. P., Klein, D., Lotze-Campen, H., Bonsch, M., et al. (2014). Investigating afforestation and bioenergy CCS as climate change mitigation strategies. Environ. Res. Lett., 9(6), 064029.
Abstract: The land-use sector can contribute to climate change mitigation not only by reducing greenhouse gas (GHG) emissions, but also by increasing carbon uptake from the atmosphere and thereby creating negative CO2 emissions. In this paper, we investigate two land-based climate change mitigation strategies for carbon removal: (1) afforestation and (2) bioenergy in combination with carbon capture and storage technology (bioenergy CCS). In our approach, a global tax on GHG emissions aimed at ambitious climate change mitigation incentivizes land-based mitigation by penalizing positive and rewarding negative CO2 emissions from the land-use system. We analyze afforestation and bioenergy CCS as standalone and combined mitigation strategies. We find that afforestation is a cost-efficient strategy for carbon removal at relatively low carbon prices, while bioenergy CCS becomes competitive only at higher prices. According to our results, cumulative carbon removal due to afforestation and bioenergy CCS is similar at the end of 21st century (600-700 GtCO(2)), while land-demand for afforestation is much higher compared to bioenergy CCS. In the combined setting, we identify competition for land, but the impact on the mitigation potential (1000 GtCO(2)) is partially alleviated by productivity increases in the agricultural sector. Moreover, our results indicate that early-century afforestation presumably will not negatively impact carbon removal due to bioenergy CCS in the second half of the 21st century. A sensitivity analysis shows that land-based mitigation is very sensitive to different levels of GHG taxes. Besides that, the mitigation potential of bioenergy CCS highly depends on the development of future bioenergy yields and the availability of geological carbon storage, while for afforestation projects the length of the crediting period is crucial.
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