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Webber, H., Martre, P., Asseng, S., Kimball, B., White, J., Ottman, M., et al. (2017). Canopy temperature for simulation of heat stress in irrigated wheat in a semi-arid environment: A multi-model comparison. Field Crops Research, 202, 21–35.
Abstract: Even brief periods of high temperatures occurring around flowering and during grain filling can severely reduce grain yield in cereals. Recently, ecophysiological and crop models have begun to represent such phenomena. Most models use air temperature (Tair) in their heat stress responses despite evidence that crop canopy temperature (Tc) better explains grain yield losses. Tc can deviate significantly from Tair based on climatic factors and the crop water status. The broad objective of this study was to evaluate whether simulation of Tc improves the ability of crop models to simulate heat stress impacts on wheat under irrigated conditions. Nine process-based models, each using one of three broad approaches (empirical, EMP; energy balance assuming neutral atmospheric stability, EBN; and energy balance correcting for the atmospheric stability conditions, EBSC) to simulate Tc, simulated grain yield under a range of temperature conditions. The models varied widely in their ability to reproduce the measured Tc with the commonly used EBN models performing much worse than either EMP or EBSC. Use of Tc to account for heat stress effects did improve simulations compared to using only Tair to a relatively minor extent, but the models that additionally use Tc on various other processes as well did not have better yield simulations. Models that simulated yield well under heat stress had varying skill in simulating Tc. For example, the EBN models had very poor simulations of Tc but performed very well in simulating grain yield. These results highlight the need to more systematically understand and model heat stress events in wheat.
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Zhang, S., Tao, F., & Zhang, Z. (2017). Uncertainty from model structure is larger than that from model parameters in simulating rice phenology in China. Europ. J. Agron., 87, 30–39.
Abstract: Rice models have been widely used in simulating and predicting rice phenology in contrasting climate zones, however the uncertainties from model structure (different equations or models) and/or model parameters were rarely investigated. Here, five rice phenological models/modules (Le., CERES-Rice, ORYZA2000, RCM, Beta Model and SIMRIW) were applied to simulate rice phenology at 23 experimental stations from 1992 to 2009 in two major rice cultivation regions of China: the northeastern China and the southwestern China. To investigate the uncertainties from model biophysical parameters, each model was run with randomly perturbed 50 sets of parameters. The results showed that the median of ensemble simulations were better than the simulation by most models. Models couldn’t simulate well in some specific years despite of parameters optimization, suggesting model structure limit model performance in some cases. The models adopting accumulative thermal time function (e.g., CERES-Rice and ORYZA2000) had better performance in the southwestern China, in contrast, those adopting exponential function (e.g., Beta model and RCM model) had better performance in the northeastern China. In northeastern China, the contribution of model structure and model parameters to model total variance was, respectively, about 55.90% and 44.10% in simulating heading date, and about 75.43% and 24.57% in simulating maturity date. In the southwestern China, the contribution of model structure and model parameters to model total variance was, respectively, about 79.97% and 27.03% in simulating heading date, about 92.15% and 7.85% in simulating maturity date. Uncertainty from model structure was the most relevant source. The results highlight that the temperature response functions of rice development rate under extreme climate conditions should be improved based on environment-controlled experimental data.
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Mansouri, M., Dumont, B., Leemans, V., & Destain, M. - F. (2014). Bayesian methods for predicting LAI and soil water content. Precision Agric., 15(2), 184–201.
Abstract: LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.
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Persson, T., Höglind, M., Gustavsson, A. - M., Halling, M., Jauhiainen, L., Niemeläinen, O., et al. (2014). Evaluation of the LINGRA timothy model under Nordic conditions. Field Crops Research, 161, 87–97.
Abstract: Simulation models are frequently applied to determine the production potential of forage grasses under various scenarios, including climate change. Thorough calibrations and evaluations of forage grass models can help improve their applicability. This study evaluated the ability of the Light Interception and Utilization Simulator-GRAss (LINGRA) model to predict biomass yield of timothy (Phleum pratense L. cv. Grindstad) in the Nordic countries. Variety trial data for the first and second year after establishment were obtained for seven locations: Jokioinen, Finland (60 degrees 48 ‘ N; 23 degrees 29 ‘ E), Maaninka, Finland (63 degrees 09 ‘ N; 27 degrees 18 ‘ E), Korpa, Iceland (64 degrees 09 ‘ N; 21 degrees 45 ‘ W), Srheim, Norway (58 degrees 41 ‘ N; 5 degrees 39 ‘ E), Lillerud, Sweden (59 degrees 24’ N; 13 degrees 16 ‘ E), Ostersund, Sweden (63 degrees 15 ‘ N; 14 degrees 34 ‘ E) and Ulna Sweden (63 degrees 49 ‘ N; 20 degrees 13 ‘ E) from 1992 to 2012. Two calibrations of the LINGRA model were carried out using Bayesian techniques. In the first of these (SRrheim calibration), data on biomass yield and underlying variables obtained from independent field trials at Srheim were used. In the second (Nordic calibration), biomass data from the other locations were used as well. The model was validated against the remaining set of biomass yields from all locations not included in the Nordic calibration. The observed total seasonal yield the first and second year after establishment was 913 and 991 g DM m(-2) respectively on average across the locations. The corresponding average simulated yield after the Srheim calibration was 1044 (root mean square error (RMSE) 258) and 1112 g DM m(-2) (RMSE 312), respectively. After the Nordic calibration, the simulated average total seasonal yield was 863 (RMSE 242) the first year and 927 g DM m(-2) (RMSE 271) the second year after establishment. The differences between the observed and simulated first cut yield followed the same patterns, whereas the prediction accuracy for second cut yield did not differ substantially between the calibration approaches.Using the parameter set from the Nordic region decreased the model predictability at Srheim compared with only using model parameters derived from this location. These results show that using biomass data from several locations, instead of only one specific location, in the calibration of the LINGRA model improved the overall prediction accuracy of first cut dry matter yield and total seasonal dry matter yield across an environmentally heterogeneous region. To further analyse the usefulness of including multi-site data in forage grass model calibrations, other forage grass models could be evaluated against the same dataset.
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Webber, H., Gaiser, T., Oomen, R., Teixeira, E., Zhao, G., Wallach, D., et al. (2016). Uncertainty in future irrigation water demand and risk of crop failure for maize in Europe. Environ. Res. Lett., .
Abstract: While crop models are widely used to assess the change in crop productivity with climate change, their skill in assessing irrigation water demand or the risk of crop failure in large area impact assessments is relatively unknown. The objective of this study is to investigate which aspects of modeling crop water use (reference crop evapotranspiration (ET0), soil water extraction, soil evaporation, soil water balance and root growth) contributes most to the variability in estimates of maize crop water use and the risk of crop failure, and demonstrate the resulting uncertainty in a climate change impact study for Europe. The SIMPLACE crop modeling framework was used to couple the LINTUL5 crop model in factorial combinations of 2-3 different approaches for simulating the 5 aspects of crop water use, resulting in 51 modeling approaches. Using experiments in France and New Zeland, analysis of total sensitivity revealed that ET0 explained the most variability in both irrigated maize water use and rainfed grain yield levels, with soil evaporation also imporatant in the French experiment. In the European impact study, net irrigation requirement differed by 36% between the Penman and Hargreaves ET0 methods in the baseline period. Average EU grain yields were similar between models, but differences approached 1-2 tonnes in parts of France and Southern Europe. EU wide esimates of crop failure in the historical period ranged between 5.4 years for Priestley-Taylor to every 7.9 years for the Penman ET0 methods. While the uncertainty in absolute values between models was significant, estimates of relative changes were similar between models, confirming the utility of crop models in assessing climate change impacts. If ET0 estimates in crop models can be improved, through the use of appropriate methods, uncertainty in irrigation water demand as well as in yield estimates under drought can be reduced.
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