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Author De Swaef, T.; Bellocchi, G.; Aper, J.; Lootens, P.; Roldan-Ruiz, I.
Title Use of identifiability analysis in designing phenotyping experiments for modelling forage production and quality Type Journal Article
Year 2019 Publication Journal of Experimental Botany Abbreviated Journal J. Experim. Bot.
Volume 70 Issue 9 Pages 2587-2604
Keywords (down) Breeding; grassland modelling; identifiability analysis; perennial; ryegrass; phenotyping; sensitivity analysis; pasture simulation-model; practical identifiability; crop; water; parameters; systems; carbon; uncertainty; sensitivity; emissions
Abstract Agricultural systems models are complex and tend to be over-parameterized with respect to observational datasets. Practical identifiability analysis based on local sensitivity analysis has proved effective in investigating identifiable parameter sets in environmental models, but has not been applied to agricultural systems models. Here, we demonstrate that identifiability analysis improves experimental design to ensure independent parameter estimation for yield and quality outputs of a complex grassland model. The Pasture Simulation model (PaSim) was used to demonstrate the effectiveness of practical identifiability analysis in designing experiments and measurement protocols within phe-notyping experiments with perennial ryegrass. Virtual experiments were designed combining three factors: frequency of measurements, duration of the experiment. and location of trials. Our results demonstrate that (i) PaSim provides sufficient detail in terms of simulating biomass yield and quality of perennial ryegrass for use in breeding, (ii) typical breeding trials are insufficient to parameterize all influential parameters, (iii) the frequency of measurements is more important than the number of growing seasons to improve the identifiability of PaSim parameters, and (iv) identifiability analysis provides a sound approach for optimizing the design of multi-location trials. Practical identifiability analysis can play an important role in ensuring proper exploitation of phenotypic data and cost-effective multi-location experimental designs. Considering the growing importance of simulation models, this study supports the design of experiments and measurement protocols in the phenotyping networks that have recently been organized.
Address 2020-02-14
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0022-0957 ISBN Medium Article
Area Expedition Conference
Notes LiveM, ft_macsur Approved no
Call Number MA @ admin @ Serial 5231
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Author Sanz-Cobena, A.; Misselbrook, T.H.; Hernaiz, P.; Vallejo, A.
Title Impact of rainfall to the effectiveness of pig slurry shallow injection method for NH3 mitigation in a Mediterranean soil Type Journal Article
Year 2019 Publication Atmospheric Environment Abbreviated Journal Atm. Environ.
Volume 216 Issue Pages 116913
Keywords (down) ammonia; micrometeorological method; slurry incorporation; trade-offs; nitrous oxide; mediterranean agroecosystems; nitrous-oxide emissions; field-applied manure; organic fertilizers; ammonia emissions; methane emissions; N2O emissions; animal manures; management; losses; grassland
Abstract Ammonia emission from fertilized cropping systems is an important concern for stakeholders, particularly in regions with high livestock densities producing large amounts of manure. Application of pig slurries can result in very large losses of N through NH3 volatilization, thus decreasing the N use efficiency (NUE) of the applied manure. Shallow incorporation has been shown to significantly abate these losses. In this field study, we assessed the impact of contrasting weather conditions on the effectiveness of shallow injection to abate NH3 emissions from pig slurry application to a Mediterranean soil. As potential trade-offs of NH3 abatement, greenhouse gas emissions were also measured under conditions of high soil moisture. Compared with surface application of slurry, shallow injection effectively and significantly decreased NH3 losses independently of weather conditions, but reductions of NH3 emission were greater after heavy rainfall. In contrast, under these conditions, shallow injection triggered higher emissions of N2O and CH4. Our findings reinforce the idea that any single-pollutant abatement strategy needs to be designed and assessed in a regional context and considering potential trade-offs in the form of other pollutants.
Address 2020-06-08
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium article
Area Expedition Conference
Notes LiveM, ft_macsur Approved no
Call Number MA @ admin @ Serial 5234
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Author Klosterhalfen, A.; Herbst, M.; Weihermueller, L.; Graf, A.; Schmidt, M.; Stadler, A.; Schneider, K.; Subke, J.-A.; Huisman, J.A.; Vereecken, H.
Title Multi-site calibration and validation of a net ecosystem carbon exchange model for croplands Type Journal Article
Year 2017 Publication Ecological Modelling Abbreviated Journal Ecol. Model.
Volume 363 Issue Pages 137-156
Keywords (down) AgroC; Soil respiration; Carbon balance; Winter wheat; Grassland; NEE; LOLIUM-PERENNE L; SOIL HETEROTROPHIC RESPIRATION; LAND-SURFACE MODELS; EDDY-COVARIANCE; WINTER-WHEAT; CARBOHYDRATE CONTENT; TURNOVER MODEL; ROTHC MODEL; ROOT RATIOS; CO2 EFFLUX
Abstract Croplands play an important role in the carbon budget of many regions. However, the estimation of their carbon balance remains difficult due to diversity and complexity of the processes involved. We report the coupling of a one-dimensional soil water, heat, and CO2 flux model (SOILCO2), a pool concept of soil carbon turnover (RothC), and a crop growth module (SUCROS) to predict the net ecosystem exchange (NEE) of carbon. The coupled model, further referred to as AgroC, was extended with routines for managed grassland as well as for root exudation and root decay. In a first step, the coupled model was applied to two winter wheat sites and one upland grassland site in Germany. The model was calibrated based on soil water content, soil temperature, biometric, and soil respiration measurements for each site, and validated in terms of hourly NEE measured with the eddy covariance technique. The overall model performance of AgroC was sufficient with a model efficiency above 0.78 and a correlation coefficient above 0.91 for NEE. In a second step, AgroC was optimized with eddy covariance NEE measurements to examine the effect of different objective functions, constraints, and data-transformations on estimated NEE. It was found that NEE showed a distinct sensitivity to the choice of objective function and the inclusion of soil respiration data in the optimization process. In particular, both positive and negative day- and nighttime fluxes were found to be sensitive to the selected optimization strategy. Additional consideration of soil respiration measurements improved the simulation of small positive fluxes remarkably. Even though the model performance of the selected optimization strategies did not diverge substantially, the resulting cumulative NEE over simulation time period differed substantially. Therefore, it is concluded that data transformations, definitions of objective functions, and data sources have to be considered cautiously when a terrestrial ecosystem model is used to determine NEE by means of eddy covariance measurements. (C) 2017 Elsevier B.V. All rights reserved.
Address 2017-11-09
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0304-3800 ISBN Medium
Area Expedition Conference
Notes CropM, ft_MACSUR Approved no
Call Number MA @ admin @ Serial 5216
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Author Tao, F.; Palosuo, T.; Roetter, R.P.; Hernandez Diaz-Ambrona, C.G.; Ines Minguez, M.; Semenov, M.A.; Kersebaum, K.C.; Cammarano, D.; Specka, X.; Nendel, C.; Srivastava, A.K.; Ewert, F.; Padovan, G.; Ferrise, R.; Martre, P.; Rodriguez, L.; Ruiz-Ramos, M.; Gaiser, T.; Hohn, J.G.; Salo, T.; Dibari, C.; Schulman, A.H.
Title Why do crop models diverge substantially in climate impact projections? A comprehensive analysis based on eight barley crop models Type Journal Article
Year 2020 Publication Agricultural and Forest Meteorology Abbreviated Journal Agricultural and Forest Meteorology
Volume 281 Issue Pages 107851
Keywords (down) agriculture; climate change; crop growth simulation; impact; model; improvement; uncertainty; air CO2 enrichment; elevated CO2; wheat growth; nitrogen dynamics; simulation-models; field experiment; atmospheric CO2; rice phenology; temperature; uncertainty
Abstract Robust projections of climate impact on crop growth and productivity by crop models are key to designing effective adaptations to cope with future climate risk. However, current crop models diverge strongly in their climate impact projections. Previous studies tried to compare or improve crop models regarding the impact of one single climate variable. However, this approach is insufficient, considering that crop growth and yield are affected by the interactive impacts of multiple climate change factors and multiple interrelated biophysical processes. Here, a new comprehensive analysis was conducted to look holistically at the reasons why crop models diverge substantially in climate impact projections and to investigate which biophysical processes and knowledge gaps are key factors affecting this uncertainty and should be given the highest priorities for improvement. First, eight barley models and eight climate projections for the 2050s were applied to investigate the uncertainty from crop model structure in climate impact projections for barley growth and yield at two sites: Jokioinen, Finland (Boreal) and Lleida, Spain (Mediterranean). Sensitivity analyses were then conducted on the responses of major crop processes to major climatic variables including temperature, precipitation, irradiation, and CO2, as well as their interactions, for each of the eight crop models. The results showed that the temperature and CO2 relationships in the models were the major sources of the large discrepancies among the models in climate impact projections. In particular, the impacts of increases in temperature and CO2 on leaf area development were identified as the major causes for the large uncertainty in simulating changes in evapotranspiration, above-ground biomass, and grain yield. Our findings highlight that advancements in understanding the basic processes and thresholds by which climate warming and CO2 increases will affect leaf area development, crop evapotranspiration, photosynthesis, and grain formation in contrasting environments are needed for modeling their impacts.
Address 2020-06-08
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium article
Area Expedition Conference
Notes CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 5232
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Author Holman, I.P.; Brown, C.; Carter, T.R.; Harrison, P.A.; Rounsevell, M.
Title Improving the representation of adaptation in climate change impact models Type Journal Article
Year 2019 Publication Regional Environmental Change Abbreviated Journal Reg. Environ. Change
Volume 19 Issue 3 Pages 711-721
Keywords (down) Adaptive capacity; Limits; Water; Land; Decision making; Integrated assessment; Land-Cover Change; Global Change; River-Basin; Integrated Assessment; Adaptive Capacity; Vulnerability; Variability; Precautionary; Agriculture; Management
Abstract Climate change adaptation is a complex human process, framed by uncertainties and constraints, which is difficult to capture in existing assessment models. Attempts to improve model representations are hampered by a shortage of systematic descriptions of adaptation processes and their relevance to models. This paper reviews the scientific literature to investigate conceptualisations and models of climate change adaptation, and the ways in which representation of adaptation in models can be improved. The review shows that real-world adaptive responses can be differentiated along a number of dimensions including intent or purpose, timescale, spatial scale, beneficiaries and providers, type of action, and sector. However, models of climate change consequences for land use and water management currently provide poor coverage of these dimensions, instead modelling adaptation in an artificial and subjective manner. While different modelling approaches do capture distinct aspects of the adaptive process, they have done so in relative isolation, without producing improved unified representations. Furthermore, adaptation is often assumed to be objective, effective and consistent through time, with only a minority of models taking account of the human decisions underpinning the choice of adaptation measures (14%), the triggers that motivate actions (38%) or the time-lags and constraints that may limit their uptake and effectiveness (14%). No models included adaptation to take advantage of beneficial opportunities of climate change. Based on these insights, transferable recommendations are made on directions for future model development that may enhance realism within models, while also advancing our understanding of the processes and effectiveness of adaptation to a changing climate.
Address 2019-04-27
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1436-3798 ISBN Medium Article
Area Expedition Conference
Notes TradeM, ft_macsur Approved no
Call Number MA @ admin @ Serial 5220
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