| Records |
| Author |
Dumont, B.; Leemans, V.; Ferrandis, S.; Bodson, B.; Destain, J.-P.; Destain, M.-F. |
| Title |
Assessing the potential of an algorithm based on mean climatic data to predict wheat yield |
Type |
Journal Article |
| Year |
2014 |
Publication |
Precision Agriculture |
Abbreviated Journal |
Precision Agric. |
| Volume |
15 |
Issue |
3 |
Pages |
255-272 |
Keywords  |
stics model; yield prediction; real-time; proxy-sensing; stochastic weather generator; crop yield; mediterranean environment; simulation-model; variability; nitrogen; ensembles; forecasts; demeter; europe |
| Abstract |
The real-time non-invasive determination of crop biomass and yield prediction is one of the major challenges in agriculture. An interesting approach lies in using process-based crop yield models in combination with real-time monitoring of the input climatic data of these models, but unknown future weather remains the main obstacle to reliable yield prediction. Since accurate weather forecasts can be made only a short time in advance, much information can be derived from analyzing past weather data. This paper presents a methodology that addresses the problem of unknown future weather by using a daily mean climatic database, based exclusively on available past measurements. It involves building climate matrix ensembles, combining different time ranges of projected mean climate data and real measured weather data originating from the historical database or from real-time measurements performed in the field. Used as an input for the STICS crop model, the datasets thus computed were used to perform statistical within-season biomass and yield prediction. This work demonstrated that a reliable predictive delay of 3-4 weeks could be obtained. In combination with a local micrometeorological station that monitors climate data in real-time, the approach also enabled us to (i) predict potential yield at the local level, (ii) detect stress occurrence and (iii) quantify yield loss (or gain) drawing on real monitored climatic conditions of the previous few days. |
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English |
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| ISSN |
1385-2256 1573-1618 |
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Article |
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CropM |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4621 |
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| Author |
Dumont, B.; Basso, B.; Leemans, V.; Bodson, B.; Destain, J.-P.; Destain, M.-F. |
| Title |
A comparison of within-season yield prediction algorithms based on crop model behaviour analysis |
Type |
Journal Article |
| Year |
2015 |
Publication |
Agricultural and Forest Meteorology |
Abbreviated Journal |
Agricultural and Forest Meteorology |
| Volume |
204 |
Issue |
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Pages |
10-21 |
| Keywords |
stics crop model; climate variability; lars-wg; yield prediction; log-normal distribution; convergence in law theorem; central limit theorem; weather generator; nitrogen balances; generic model; wheat; simulation; climate; stics; variability; skewness; efficiency |
| Abstract |
The development of methodologies for predicting crop yield, in real-time and in response to different agro-climatic conditions, could help to improve the farm management decision process by providing an analysis of expected yields in relation to the costs of investment in particular practices. Based on the use of crop models, this paper compares the ability of two methodologies to predict wheat yield (Triticum aestivum L.), one based on stochastically generated climatic data and the other on mean climate data. It was shown that the numerical experimental yield distribution could be considered as a log-normal distribution. This function is representative of the overall model behaviour. The lack of statistical differences between the numerical realisations and the logistic curve showed in turn that the Generalised Central Limit Theorem (GCLT) was applicable to our case study. In addition, the predictions obtained using both climatic inputs were found to be similar at the inter and intra-annual time-steps, with the root mean square and normalised deviation values below an acceptable level of 10% in 90% of the climatic situations. The predictive observed lead-times were also similar for both approaches. Given (i) the mathematical formulation of crop models, (ii) the applicability of the CLT and GLTC to the climatic inputs and model outputs, respectively, and (iii) the equivalence of the predictive abilities, it could be concluded that the two methodologies were equally valid in terms of yield prediction. These observations indicated that the Convergence in Law Theorem was applicable in this case study. For purely predictive purposes, the findings favoured an algorithm based on a mean climate approach, which needed far less time (by 300-fold) to run and converge on same predictive lead time than the stochastic approach. (C) 2015 Elsevier B.V. All rights reserved. |
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0168-1923 |
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Article |
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CropM |
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no |
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MA @ admin @ |
Serial |
4647 |
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| Author |
Mansouri, M.; Dumont, B.; Destain, M.-F. |
| Title |
Modeling and prediction of nonlinear environmental system using Bayesian methods |
Type |
Journal Article |
| Year |
2013 |
Publication |
Computers and Electronics in Agriculture |
Abbreviated Journal |
Computers and Electronics in Agriculture |
| Volume |
92 |
Issue |
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Pages |
16-31 |
| Keywords |
state and parameter estimation; variational filter; particle filter; extended kalman filter; nonlinear environmental system; leaf area index and soil moisture model; extended kalman filter; state-space models; parameter-estimation; particle filters; navigation; tutorial; tracking |
| Abstract |
An environmental dynamic system is usually modeled as a nonlinear system described by a set of nonlinear ODEs. A central challenge in computational modeling of environmental systems is the determination of the model parameters. In these cases, estimating these variables or parameters from other easily obtained measurements can be extremely useful. This work addresses the problem of monitoring and modeling a leaf area index and soil moisture model (LSM) using state estimation. The performances of various conventional and state-of-the-art state estimation techniques are compared when they are utilized to achieve this objective. These techniques include the extended Kalman filter (EKF), particle filter (PF), and the more recently developed technique variational filter (VF). Specifically, two comparative studies are performed. In the first comparative study, the state variables (the leaf-area index LAI, the volumetric water content of the soil layer 1, HUR1 and the volumetric water content of the soil layer 2, HUR2) are estimated from noisy measurements of these variables, and the various estimation techniques are compared by computing the estimation root mean square error (RMSE) with respect to the noise-free data. In the second comparative study, the state variables as well as the model parameters are simultaneously estimated. In this case, in addition to comparing the performances of the various state estimation techniques, the effect of number of estimated model parameters on the accuracy and convergence of these techniques are also assessed. The results of both comparative studies show that the PF provides a higher accuracy than the EKF, which is due to the limited ability of the EKF to handle highly nonlinear processes. The results also show that the VF provides a significant improvement over the PF because, unlike the PF which depends on the choice of sampling distribution used to estimate the posterior distribution, the VF yields an optimum choice of the sampling distribution, which also accounts for the observed data. The results of the second comparative study show that, for all techniques, estimating more model parameters affects the estimation accuracy as well as the convergence of the estimated states and parameters. However, the VF can still provide both convergence as well as accuracy related advantages over other estimation methods. (C) 2013 Elsevier B.V. All rights reserved. |
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Edition |
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0168-1699 |
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CropM |
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no |
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MA @ admin @ |
Serial |
4495 |
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Brylińska, M.; Sobkowiak, S.; Stefańczyk, E.; Śliwka, J. |
| Title |
Potato cultivation system affects population structure of Phytophthora infestans |
Type |
Journal Article |
| Year |
2016 |
Publication |
Fungal Ecology |
Abbreviated Journal |
Fungal Ecology |
| Volume |
20 |
Issue |
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Pages |
132-143 |
| Keywords |
SSR; Population genetic structure; Late blight; Potato; late blight resistance; mating-type; microsatellite markers; phenotypic diversity; sexual reproduction; genotypic diversity; nordic countries; severe outbreaks; sarpo mira; pathogenicity |
| Abstract |
Phytophthora infestans is one of the most destructive potato pathogens. Many factors influence the population structure of P. infestans, including migration, climate and type of potato cultivation. Here, we analyse 365 P. infestans isolates collected from three regions of Poland over three years. We determined mating type, mitochondrial haplotype, resistance to metalaxyl, virulence and polymorphism at 14 simple sequence repeat (SSR) loci. Analysis of SSR markers showed high genetic diversity associated with this population. Model-based structure analysis grouped 299 unique genotypes into four main clusters. The P. infestans isolates collected from the Mlochow region, which has the most intensive level of potato cultivation, formed a distinct cluster, indicating a strong effect of the cultivation system on pathogen population structure. Three clusters contained isolates with frequent presence of three alleles at one locus, which may affect their capacity for sexual reproduction and preserve groups of fit genotypes that propagate asexually. (C) 2016 Elsevier Ltd and The British Mycological Society. |
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English |
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1754-5048 |
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CropM, ft_macsur |
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no |
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MA @ admin @ |
Serial |
4720 |
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| Author |
Hoffmann, H.; Zhao, G.; van Bussel, L.G.J.; Enders, A.; Specka, X.; Sosa, C.; Yeluripati, J.; Tao, F.; Constantin, J.; Raynal, H.; Teixeira, E.; Grosz, B.; Doro, L.; Zhao, Z.; Wang, E.; Nendel, C.; Kersebaum, K.C.; Haas, E.; Kiese, R.; Klatt, S.; Eckersten, H.; Vanuytrecht, E.; Kuhnert, M.; Lewan, E.; Rötter, R.; Roggero, P.P.; Wallach, D.; Cammarano, D.; Asseng, S.; Krauss, G.; Siebert, S.; Gaiser, T.; Ewert, F. |
| Title |
Variability of effects of spatial climate data aggregation on regional yield simulation by crop models |
Type |
Journal Article |
| Year |
2015 |
Publication |
Climate Research |
Abbreviated Journal |
Clim. Res. |
| Volume |
65 |
Issue |
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Pages |
53-69 |
| Keywords |
spatial aggregation effects; crop simulation model; input data; scaling; variability; yield simulation; model comparison; input data aggregation; systems simulation; nitrogen dynamics; data resolution; n2o emissions; winter-wheat; scale; water; impact; apsim |
| Abstract |
Field-scale crop models are often applied at spatial resolutions coarser than that of the arable field. However, little is known about the response of the models to spatially aggregated climate input data and why these responses can differ across models. Depending on the model, regional yield estimates from large-scale simulations may be biased, compared to simulations with high-resolution input data. We evaluated this so-called aggregation effect for 13 crop models for the region of North Rhine-Westphalia in Germany. The models were supplied with climate data of 1 km resolution and spatial aggregates of up to 100 km resolution raster. The models were used with 2 crops (winter wheat and silage maize) and 3 production situations (potential, water-limited and nitrogen-water-limited growth) to improve the understanding of errors in model simulations related to data aggregation and possible interactions with the model structure. The most important climate variables identified in determining the model-specific input data aggregation on simulated yields were mainly related to changes in radiation (wheat) and temperature (maize). Additionally, aggregation effects were systematic, regardless of the extent of the effect. Climate input data aggregation changed the mean simulated regional yield by up to 0.2 t ha(-1), whereas simulated yields from single years and models differed considerably, depending on the data aggregation. This implies that large-scale crop yield simulations are robust against climate data aggregation. However, large-scale simulations can be systematically biased when being evaluated at higher temporal or spatial resolution depending on the model and its parameterization. |
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English |
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Edition |
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0936-577x 1616-1572 |
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Article |
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Conference |
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CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4694 |
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