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Author |
Rötter, R.P.; Tao, F.; Höhn, J.G.; Palosuo, T. |
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Title |
Use of crop simulation modelling to aid ideotype design of future cereal cultivars |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3463-3476 |
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Keywords  |
Breeding/*methods; Climate Change; *Computer Simulation; Ecotype; Edible Grain/*growth & development; *Models, Theoretical; cereals; climate extremes; crop growth simulation; ensemble modelling; future cultivars; genetic modelling; ideotype breeding; model improvement; model-aided design |
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Abstract |
A major challenge of the 21st century is to achieve food supply security under a changing climate and roughly a doubling in food demand by 2050 compared to present, the majority of which needs to be met by the cereals wheat, rice, maize, and barley. Future harvests are expected to be especially threatened through increased frequency and severity of extreme events, such as heat waves and drought, that pose particular challenges to plant breeders and crop scientists. Process-based crop models developed for simulating interactions between genotype, environment, and management are widely applied to assess impacts of environmental change on crop yield potentials, phenology, water use, etc. During the last decades, crop simulation has become important for supporting plant breeding, in particular in designing ideotypes, i.e. ‘model plants’, for different crops and cultivation environments. In this review we (i) examine the main limitations of crop simulation modelling for supporting ideotype breeding, (ii) describe developments in cultivar traits in response to climate variations, and (iii) present examples of how crop simulation has supported evaluation and design of cereal cultivars for future conditions. An early success story for rice demonstrates the potential of crop simulation modelling for ideotype breeding. Combining conventional crop simulation with new breeding methods and genetic modelling holds promise to accelerate delivery of future cereal cultivars for different environments. Robustness of model-aided ideotype design can further be enhanced through continued improvements of simulation models to better capture effects of extremes and the use of multi-model ensembles. |
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2016-10-31 |
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English |
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0022-0957 1460-2431 |
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Review |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
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4804 |
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Author |
Pilbeam, D.J. |
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Title |
Breeding crops for improved mineral nutrition under climate change conditions |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3511-3421 |
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Keywords |
Breeding/*methods; *Climate Change; Crops, Agricultural/*growth & development; Environment; Minerals/*metabolism; *Nutritional Physiological Phenomena; Micronutrient; nitrogen; nutrient availability; nutrient use efficiency; phosphorus; quantitative trait loci (QTLs) |
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Abstract |
Improvements in understanding how climate change may influence chemical and physical processes in soils, how this may affect nutrient availability, and how plants may respond to changed availability of nutrients will influence crop breeding programmes. The effects of increased atmospheric CO2 and warmer temperatures, both individually and combined, on soil microbial activity, including mycorrhizas and N-fixing organisms, are evaluated, together with their implications for nutrient availability. Potential changes to plant growth, and the combined effects of soil and plant changes on nutrient uptake, are discussed. The organization of research on the efficient use of macro- and micronutrients by crops under climate change conditions is outlined, including analysis of QTLs for nutrient efficiency. Suggestions for how the information gained can be used in plant breeding programmes are given. |
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1460-2431; 0022-0957 |
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CropM |
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Call Number |
MA @ admin @ |
Serial |
4575 |
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Author |
Heinemann, A.B.; Barrios-Perez, C.; Ramirez-Villegas, J.; Arango-Londoño, D.; Bonilla-Findji, O.; Medeiros, J.C.; Jarvis, A. |
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Title |
Variation and impact of drought-stress patterns across upland rice target population of environments in Brazil |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3625-3638 |
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Keywords |
Brazil; Climate; Computer Simulation; Crops, Agricultural/physiology; *Droughts; *Environment; Geography; Oryza/*physiology; Plant Transpiration; *Stress, Physiological; Water; Breeding; Oryza sativa; environment classification; modelling; water deficit. |
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Abstract |
The upland rice (UR) cropped area in Brazil has decreased in the last decade. Importantly, a portion of this decrease can be attributed to the current UR breeding programme strategy, according to which direct grain yield selection is targeted primarily to the most favourable areas. New strategies for more-efficient crop breeding under non-optimal conditions are needed for Brazil’s UR regions. Such strategies should include a classification of spatio-temporal yield variations in environmental groups, as well as a determination of prevalent drought types and their characteristics (duration, intensity, phenological timing, and physiological effects) within those environmental groups. This study used a process-based crop model to support the Brazilian UR breeding programme in their efforts to adopt a new strategy that accounts for the varying range of environments where UR is currently cultivated. Crop simulations based on a commonly grown cultivar (BRS Primavera) and statistical analyses of simulated yield suggested that the target population of environments can be divided into three groups of environments: a highly favorable environment (HFE, 19% of area), a favorable environment (FE, 44%), and least favourable environment (LFE, 37%). Stress-free conditions dominated the HFE group (69% likelihood) and reproductive stress dominated the LFE group (68% likelihood), whereas reproductive and terminal drought stress were found to be almost equally likely to occur in the FE group. For the best and worst environments, we propose specific adaptation focused on the representative stress, while for the FE, wide adaptation to drought is suggested. ‘Weighted selection’ is also a possible strategy for the FE and LFE environment groups. |
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0022-0957 1460-2431 |
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CropM |
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Call Number |
MA @ admin @ |
Serial |
4560 |
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Author |
Ben Touhami, H.; Bellocchi, G. |
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Title |
Bayesian calibration of the Pasture Simulation model (PaSim) to simulate European grasslands under water stress |
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Journal Article |
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Year |
2015 |
Publication |
Ecological Informatics |
Abbreviated Journal |
Ecological Informatics |
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Volume |
30 |
Issue |
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Pages |
356-364 |
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Keywords |
Bayesian calibration framework; Grasslands; Pasture Simulation model; (PaSim); integrated assessment models; chain monte-carlo; climate-change; computation; impacts; vulnerability; likelihoods; france |
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As modeling becomes a more widespread practice in the agro-environmental sciences, scientists need reliable tools to calibrate models against ever more complex and detailed data. We present a generic Bayesian computation framework for grassland simulation, which enables parameter estimation in the Bayesian formalism by using Monte Carlo approaches. We outline the underlying rationale, discuss the computational issues, and provide results from an application of the Pasture Simulation model (PaSim) to three European grasslands. The framework was suited to investigate the challenging problem of calibrating complex biophysical models to data from altered scenarios generated by precipitation reduction (water stress conditions). It was used to infer the parameters of manipulated grassland systems and to assess the gain in uncertainty reduction by updating parameter distributions using measurements of the output variables. |
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ISSN |
1574-9541 |
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Notes |
CropM, LiveM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4697 |
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Author |
Özkan, Ş.; Hill, J. |
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Title |
Implementing innovative farm management practices on dairy farms:a review of feeding systems |
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Journal Article |
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Year |
2015 |
Publication |
Turkish Journal of Veterinary and Animal Sciences |
Abbreviated Journal |
Turkish Journal of Veterinary and Animal Sciences |
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Volume |
39 |
Issue |
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Pages |
1-9 |
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Keywords |
australia; dairy; double-cropping; feeding system; pasture-based; profitability; forage crop systems; south-west victoria; nutritive characteristics; interannual variation; botanical composition; herbage accumulation; growth-rates; pasture; australia; cows |
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Abstract |
The Australian dairy industry relies primarily on pasture for its feed supply. However, the variability in rainfall negatively affects plant growth, leading to uncertainty in dryland feed supply, especially during periods of high milk price. New feeding (complementary) systems combining perennial ryegrass with another crop and/or pasture species may have the potential to mitigate this seasonal risk and improve productivity and profitability by providing off-season feed. To date, the majority of research studying the integration of alternative crops into pasture-based systems has focused on substitution and utilization of alternative feed sources. There has been little emphasis on the impacts of integration of forage crops into pasture-based systems. This review focuses on pasture-based feeding systems in southeastern Australia and how transitioning of systems contributes to improved productivity leading to improved profitability for dairy farmers. |
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ISSN |
1300-0128 |
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LiveM |
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Call Number |
MA @ admin @ |
Serial |
4577 |
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