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Doro, L., Jones, C., Williams, J. R., Norfleet, M. L., Izaurralde, R. C., Wang, X., et al. (2017). The Variable Saturation Hydraulic Conductivity Method for Improving Soil Water Content Simulation in EPIC and APEX Models. Vadose Zone Journal, 16(13).
Abstract: Soil water percolation is a key process in the life cycle of water in fields, watersheds, and river basins. The Environmental Policy Integrated Climate (EPIC) and the Agricultural Policy/Environmental eXtender (APEX) are continuous models developed for evaluating the environmental effects of agricultural management. Traditionally, these models have simulated soil water percolation processes using a tipping-bucket approach, with the rate of flow limited by the saturated hydraulic conductivity. This simple approach often leads to inaccuracy in simulating elevated soil water conditions where soil water content (SWC) levels may remain above field capacity under prolonged wet weather periods or limited drainage. To overcome this deficiency, a new sub-model, the variable saturation hydraulic conductivity (VSHC) method, was developed for simulating soil water percolation processes using a nonlinear equation to estimate the effective hydraulic conductivity as a function of the SWC and soil properties. The VSHC method was evaluated at three sites in the United States and two sites in Europe. In addition, a numerical solution of the Richards equation was used as a benchmark for SWC comparison. Results show that the VSHC method substantially improves the accuracy of the SWC simulation in long-term simulations, particularly during wet periods. At the watershed scale, results on the Riesel Y2 watershed indicate that the VSHC method enhances model performance in the high-flow regime of channel peak flows because of the improved estimation of SWC, which implies that the improved SWC simulation at the field scale is beneficial to hydrologic modeling at the watershed scale.
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Rötter, R. P., Tao, F., Höhn, J. G., & Palosuo, T. (2015). Use of crop simulation modelling to aid ideotype design of future cereal cultivars. J. Experim. Bot., 66(12), 3463–3476.
Abstract: A major challenge of the 21st century is to achieve food supply security under a changing climate and roughly a doubling in food demand by 2050 compared to present, the majority of which needs to be met by the cereals wheat, rice, maize, and barley. Future harvests are expected to be especially threatened through increased frequency and severity of extreme events, such as heat waves and drought, that pose particular challenges to plant breeders and crop scientists. Process-based crop models developed for simulating interactions between genotype, environment, and management are widely applied to assess impacts of environmental change on crop yield potentials, phenology, water use, etc. During the last decades, crop simulation has become important for supporting plant breeding, in particular in designing ideotypes, i.e. ‘model plants’, for different crops and cultivation environments. In this review we (i) examine the main limitations of crop simulation modelling for supporting ideotype breeding, (ii) describe developments in cultivar traits in response to climate variations, and (iii) present examples of how crop simulation has supported evaluation and design of cereal cultivars for future conditions. An early success story for rice demonstrates the potential of crop simulation modelling for ideotype breeding. Combining conventional crop simulation with new breeding methods and genetic modelling holds promise to accelerate delivery of future cereal cultivars for different environments. Robustness of model-aided ideotype design can further be enhanced through continued improvements of simulation models to better capture effects of extremes and the use of multi-model ensembles.
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Comadira, G., Rasool, B., Karpinska, B., Morris, J., Verrall, S. R., Hedley, P. E., et al. (2015). Nitrogen deficiency in barley (Hordeum vulgare) seedlings induces molecular and metabolic adjustments that trigger aphid resistance. J. Experim. Bot., 66(12), 3639–3655.
Abstract: Agricultural nitrous oxide (N2O) pollution resulting from the use of synthetic fertilizers represents a significant contribution to anthropogenic greenhouse gas emissions, providing a rationale for reduced use of nitrogen (N) fertilizers. Nitrogen limitation results in extensive systems rebalancing that remodels metabolism and defence processes. To analyse the regulation underpinning these responses, barley (Horedeum vulgare) seedlings were grown for 7 d under N-deficient conditions until net photosynthesis was 50% lower than in N-replete controls. Although shoot growth was decreased there was no evidence for the induction of oxidative stress despite lower total concentrations of N-containing antioxidants. Nitrogen-deficient barley leaves were rich in amino acids, sugars and tricarboxylic acid cycle intermediates. In contrast to N-replete leaves one-day-old nymphs of the green peach aphid (Myzus persicae) failed to reach adulthood when transferred to N-deficient barley leaves. Transcripts encoding cell, sugar and nutrient signalling, protein degradation and secondary metabolism were over-represented in N-deficient leaves while those associated with hormone metabolism were similar under both nutrient regimes with the exception of mRNAs encoding proteins involved in auxin metabolism and responses. Significant similarities were observed between the N-limited barley leaf transcriptome and that of aphid-infested Arabidopsis leaves. These findings not only highlight significant similarities between biotic and abiotic stress signalling cascades but also identify potential targets for increasing aphid resistance with implications for the development of sustainable agriculture.
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Daccache, A., Ciurana, J. S., Diaz, J. A. R., & Knox, J. W. (2014). Water and energy footprint of irrigated agriculture in the Mediterranean region. Environ. Res. Lett., 9(12), 124014.
Abstract: Irrigated agriculture constitutes the largest consumer of freshwater in the Mediterranean region and provides a major source of income and employment for rural livelihoods. However, increasing droughts and water scarcity have highlighted concerns regarding the environmental sustainability of agriculture in the region. An integrated assessment combining a gridded water balance model with a geodatabase and GIS has been developed and used to assess the water demand and energy footprint of irrigated production in the region. Modelled outputs were linked with crop yield and water resources data to estimate water (m(3) kg(-1)) and energy (CO2 kg(-1)) productivity and identify vulnerable areas or `hotspots’. For a selected key crops in the region, irrigation accounts for 61 km(3) yr(-1) of water abstraction and 1.78 Gt CO2 emissions yr-1, with most emissions from sunflower (73 kg CO2/t) and cotton (60 kg CO2/t) production. Wheat is a major strategic crop in the region and was estimated to have a water productivity of 1000 tMm(-3) and emissions of 31 kg CO2/t. Irrigation modernization would save around 8 km(3) of water but would correspondingly increase CO2 emissions by around +135\%. Shifting from rain-fed to irrigated production would increase irrigation demand to 166 km(3) yr(-1) (+137\%) whilst CO2 emissions would rise by +270\%. The study has major policy implications for understanding the water-energy-food nexus in the region and the trade-offs between strategies to save water, reduce CO2 emissions and/or intensify food production.
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Halford, N. G., & Foyer, C. H. (2015). Producing a road map that enables plants to cope with future climate change. J. Experim. Bot., 66(12), 3433–3434.
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