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Author |
Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F. |
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Title |
Bayesian methods for predicting LAI and soil water content |
Type |
Journal Article |
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Year |
2014 |
Publication |
Precision Agriculture |
Abbreviated Journal |
Precision Agric. |
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Volume |
15 |
Issue  |
2 |
Pages |
184-201 |
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Keywords |
crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state |
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Abstract |
LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation. |
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1385-2256 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4629 |
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Author |
Andreoli, V.; Cassardo, C.; Iacona, L.T.; Spanna, F. |
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Title |
Description and Preliminary Simulations with the Italian Vineyard Integrated Numerical Model for Estimating Physiological Values (IVINE) |
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Journal Article |
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Year |
2019 |
Publication |
Agronomy |
Abbreviated Journal |
Agronomy |
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Volume |
9 |
Issue |
2 |
Pages |
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Keywords |
viticulture; crop model; phenology; physiological processes; climate; micrometeorology; microclimate; climate change; water status; balance model; crop; phenology; growth; STICS; implementation; carbon; yield |
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Abstract |
The numerical crop growth model Italian Vineyard Integrated Numerical model for Estimating physiological values (IVINE) was developed in order to evaluate environmental forcing effects on vine growth. The IVINE model simulates vine growth processes with parameterizations, allowing the understanding of plant conditions at a vineyard scale. It requires a set of meteorology data and soil water status as boundary conditions. The primary model outputs are main phenological stages, leaf development, yield, and sugar concentration. The model requires setting some variety information depending on the cultivar: At present, IVINE is optimized for Vitis vinifera L. Nebbiolo, a variety grown mostly in the Piedmont region (northwestern Italy). In order to evaluate the model accuracy, IVINE was validated using experimental observations gathered in Piedmontese vineyards, showing performances similar or slightly better than those of other widely used crop models. The results of a sensitivity analysis performed to highlight the effects of the variations of air temperature and soil water potential input variables on IVINE outputs showed that most phenological stages anticipated with increasing temperatures, while berry sugar content saturated at about 25.5 °Bx. Long-term (60 years, in the period 1950–2009) simulations performed over a Piedmontese subregion showed statistically significant variations of most IVINE output variables, with larger time trend slopes referring to the most recent 30-year period (1980–2009), thus confirming that ongoing climate change started influencing Piedmontese vineyards in 1980. |
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2019-02-21 |
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2073-4395 |
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CropM, ft_macsur |
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MA @ admin @ |
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5218 |
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Semenov, M.A.; Stratonovitch, P.; Alghabari, F.; Gooding, M.J. |
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Title |
Adapting wheat in Europe for climate change |
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Journal Article |
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Year |
2014 |
Publication |
Journal of Cereal Science |
Abbreviated Journal |
J. Ceareal Sci. |
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Volume |
59 |
Issue |
3 |
Pages |
245-256 |
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Keywords |
A, maximum area of flag leaf area; ABA, abscisic acid; CV, coefficient of variation; Crop improvement; Crop modelling; FC, field capacity; GMT, Greenwich mean time; GS, growth stage; Gf, grain filling duration; HI, harvest index; HSP, heat shock protein; Heat and drought tolerance; Impact assessment; LAI, leaf area index; Ph, phylochron; Pp, photoperiod response; Ru, root water uptake; S, duration of leaf senescence; SF, drought stress factor; Sirius; Wheat ideotype |
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Increasing cereal yield is needed to meet the projected increased demand for world food supply of about 70% by 2050. Sirius, a process-based model for wheat, was used to estimate yield potential for wheat ideotypes optimized for future climatic projections for ten wheat growing areas of Europe. It was predicted that the detrimental effect of drought stress on yield would be decreased due to enhanced tailoring of phenology to future weather patterns, and due to genetic improvements in the response of photosynthesis and green leaf duration to water shortage. Yield advances could be made through extending maturation and thereby improve resource capture and partitioning. However the model predicted an increase in frequency of heat stress at meiosis and anthesis. Controlled environment experiments quantify the effects of heat and drought at booting and flowering on grain numbers and potential grain size. A current adaptation of wheat to areas of Europe with hotter and drier summers is a quicker maturation which helps to escape from excessive stress, but results in lower yields. To increase yield potential and to respond to climate change, increased tolerance to heat and drought stress should remain priorities for the genetic improvement of wheat. |
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ISSN |
0733-5210 |
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Review |
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CropM, ft_macsur |
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MA @ admin @ |
Serial |
4543 |
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Author |
Semenov, M.A.; Stratonovitch, P. |
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Title |
Designing high-yielding wheat ideotypes for a changing climate |
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Journal Article |
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Year |
2013 |
Publication |
Food and Energy Security |
Abbreviated Journal |
Food Energy Secur. |
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2 |
Issue |
3 |
Pages |
185-196 |
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Keywords |
Climate change impacts; crop modeling; LARS-WG; Sirius; wheat |
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Global warming is characterized by shifts in weather patterns and increases in climatic variability and extreme events. New wheat cultivars will be required for a rapidly changing environment, putting severe pressure on breeders who must select for climate conditions which can only be predicted with a great degree of uncertainty. To assist breeders to identify key wheat traits for improvements under climate change, wheat ideotypes can be designed and tested in silico using a wheat simulation model for a wide range of future climate scenarios predicted by global climate models. A wheat ideotype is represented by a set of cultivar parameters in a model, which could be optimized for best wheat performance under projected climate change. As an example, high-yielding wheat ideotypes were designed at two contrasting European sites for the 2050 (A1B) climate scenario. Simulations showed that wheat yield potential can be substantially increased for new ideotypes compared with current wheat varieties under climate change. The main factors contributing to yield increase were improvement in light conversion efficiency, extended duration of grain filling resulting in a higher harvest index, and optimal phenology. |
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ISSN |
2048-3694 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
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4505 |
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Author |
Wallach, D.; Mearns, L.O.; Ruane, A.C.; Rötter, R.P.; Asseng, S. |
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Title |
Lessons from climate modeling on the design and use of ensembles for crop modeling |
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Journal Article |
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Year |
2016 |
Publication |
Climatic Change |
Abbreviated Journal |
Clim. Change |
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Volume |
139 |
Issue |
3-4 |
Pages |
551-564 |
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Keywords |
change projections; elevated CO2; uncertainty; wheat; water; soil; simulations; yield; rice; 21st-century; Model ensembles; Crop models; Climate models; Model weighting; Super ensembles |
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Abstract |
Working with ensembles of crop models is a recent but important development in crop modeling which promises to lead to better uncertainty estimates for model projections and predictions, better predictions using the ensemble mean or median, and closer collaboration within the modeling community. There are numerous open questions about the best way to create and analyze such ensembles. Much can be learned from the field of climate modeling, given its much longer experience with ensembles. We draw on that experience to identify questions and make propositions that should help make ensemble modeling with crop models more rigorous and informative. The propositions include defining criteria for acceptance of models in a crop MME, exploring criteria for evaluating the degree of relatedness of models in a MME, studying the effect of number of models in the ensemble, development of a statistical model of model sampling, creation of a repository for MME results, studies of possible differential weighting of models in an ensemble, creation of single model ensembles based on sampling from the uncertainty distribution of parameter values or inputs specifically oriented toward uncertainty estimation, the creation of super ensembles that sample more than one source of uncertainty, the analysis of super ensemble results to obtain information on total uncertainty and the separate contributions of different sources of uncertainty and finally further investigation of the use of the multi-model mean or median as a predictor. |
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2017-01-06 |
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English |
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ISSN |
0165-0009 |
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CropM, ft_MACSUR |
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Call Number |
MA @ admin @ |
Serial |
4933 |
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