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Dumont, B., Basso, B., Bodson, B., Destain, J. - P., & Destain, M. - F. (2015). Climatic risk assessment to improve nitrogen fertilisation recommendations: A strategic crop model-based approach. European Journal of Agronomy, 65, 10–17.
Abstract: Within the context of nitrogen (N) management, since 1950, with the rapid intensification of agriculture, farmers have often applied much larger fertiliser quantities than what was required to reach the yield potential. However, to prevent pollution of surface and groundwater induced by nitrates, The European Community launched The European Nitrates Directive 91/6/76/EEC. In 2002, in Wallonia (Belgium), the Nitrates Directive has been transposed under the Sustainable Nitrogen Management in Agriculture Program (PGDA), with the aim of maintaining productivity and revenue for the country’s farmers, while reducing the environmental impact of excessive N application. A feasible approach for addressing climatic uncertainty lies in the use of crop models such as the one commonly known as STICS (simulateur multidisciplinaire pour les cultures standard). These models allow the impact on crops of the interaction between cropping systems and climatic records to be assessed. Comprehensive historical climatic records are rare, however, and therefore the yield distribution values obtained using such an approach can be discontinuous. In order to obtain better and more detailed yield distribution information, the use of a high number of stochastically generated climate time series was proposed, relying on the LARS-Weather Generator. The study focused on the interactions between varying N practices and climatic conditions. Historically and currently, Belgian farmers apply 180 kg N ha(-1), split into three equal fractions applied at the tillering, stem elongation and flag-leaf stages. This study analysed the effectiveness of this treatment in detail, comparing it to similar practices where only the N rates applied at the flag-leaf stage were modified. Three types of farmer decision-making were analysed. The first related to the choice of N strategy for maximising yield, the second to obtaining the highest net revenue, and the third to reduce the environmental impact of potential N leaching, which carries the likelihood of taxation if inappropriate N rates are applied. The results showed reduced discontinuity in the yield distribution values thus obtained. In general, the modulation of N levels to accord with current farmer practices showed considerable asymmetry. In other words, these practices maximised the probability of achieving yields that were at least superior to the mean of the distribution values, thus reducing risk for the farmers. The practice based on applying the highest amounts (60-60-100 kg N ha(-1)) produced the best yield distribution results. When simple economical criteria were computed, the 60-60-80 kg N ha(-1) protocol was found to be optimal for 80-90% of the time. There were no statistical differences, however, between this practice and Belgian farmers’ current practice. When the taxation linked to a high level of potentially leachable N remaining in the soil after harvest was considered, this methodology clearly showed that, in 3 years out of 4,30 kg N ha(-1) could systematically be saved in comparison with the usual practice.
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Dumont, B., Basso, B., Leemans, V., Bodson, B., Destain, J. - P., & Destain, M. - F. (2015). A comparison of within-season yield prediction algorithms based on crop model behaviour analysis. Agricultural and Forest Meteorology, 204, 10–21.
Abstract: The development of methodologies for predicting crop yield, in real-time and in response to different agro-climatic conditions, could help to improve the farm management decision process by providing an analysis of expected yields in relation to the costs of investment in particular practices. Based on the use of crop models, this paper compares the ability of two methodologies to predict wheat yield (Triticum aestivum L.), one based on stochastically generated climatic data and the other on mean climate data. It was shown that the numerical experimental yield distribution could be considered as a log-normal distribution. This function is representative of the overall model behaviour. The lack of statistical differences between the numerical realisations and the logistic curve showed in turn that the Generalised Central Limit Theorem (GCLT) was applicable to our case study. In addition, the predictions obtained using both climatic inputs were found to be similar at the inter and intra-annual time-steps, with the root mean square and normalised deviation values below an acceptable level of 10% in 90% of the climatic situations. The predictive observed lead-times were also similar for both approaches. Given (i) the mathematical formulation of crop models, (ii) the applicability of the CLT and GLTC to the climatic inputs and model outputs, respectively, and (iii) the equivalence of the predictive abilities, it could be concluded that the two methodologies were equally valid in terms of yield prediction. These observations indicated that the Convergence in Law Theorem was applicable in this case study. For purely predictive purposes, the findings favoured an algorithm based on a mean climate approach, which needed far less time (by 300-fold) to run and converge on same predictive lead time than the stochastic approach. (C) 2015 Elsevier B.V. All rights reserved.
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Dumont, B., Leemans, V., Mansouri, M., Bodson, B., Destain, J. - P., & Destain, M. - F. (2014). Parameter identification of the STICS crop model, using an accelerated formal MCMC approach. Env. Model. Softw., 52, 121–135.
Abstract: This study presents a Bayesian approach for the parameters’ identification of the STICS crop model based on the recently developed Differential Evolution Adaptive Metropolis (DREAM) algorithm. The posterior distributions of nine specific crop parameters of the STICS model were sampled with the aim to improve the growth simulations of a winter wheat (Triticum aestivum L) culture. The results obtained with the DREAM algorithm were initially compared to those obtained with a Nelder-Mead Simplex algorithm embedded within the OptimiSTICS package. Then, three types of likelihood functions implemented within the DREAM algorithm were compared, namely the standard least square, the weighted least square, and a transformed likelihood function that makes explicit use of the coefficient of variation (CV). The results showed that the proposed CV likelihood function allowed taking into account both noise on measurements and heteroscedasticity which are regularly encountered in crop modelling. (C) 2013 Elsevier Ltd. All rights reserved.
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Hidy, D., Barcza, Z., Haszpra, L., Churkina, G., Pintér, K., & Nagy, Z. (2012). Development of the Biome-BGC model for simulation of managed herbaceous ecosystems. Ecol. Model., 226, 99–119.
Abstract: Apart from measurements, numerical models are the most convenient instruments to analyze the carbon and water balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based Biome-BGC model is widely used to simulate the storage and flux of water, carbon, and nitrogen within the vegetation, litter, and soil of unmanaged terrestrial ecosystems. Considering herbaceous vegetation related simulations with Biome-BGC, soil moisture and growing season control on ecosystem functioning is inaccurate due to the simple soil hydrology and plant phenology representation within the model. Consequently, Biome-BGC has limited applicability in herbaceous ecosystems because (1) they are usually managed; (2) they are sensitive to soil processes, most of all hydrology; and (3) their carbon balance is closely connected with the growing season length. Our aim was to improve the applicability of Biome-BGC for managed herbaceous ecosystems by implementing several new modules, including management. A new index (heatsum growing season index) was defined to accurately estimate the first and the final days of the growing season. Instead of a simple bucket soil sub-model, a multilayer soil sub-model was implemented, which can handle the processes of runoff, diffusion and percolation. A new module was implemented to simulate the ecophysiological effect of drought stress on plant mortality. Mowing and grazing modules were integrated in order to quantify the functioning of managed ecosystems. After modifications, the Biome-BGC model was calibrated and validated using eddy covariance-based measurement data collected in Hungarian managed grassland ecosystems. Model calibration was performed based on the Bayes theorem. As a result of these developments and calibration, the performance of the model was substantially improved. Comparison with measurement-based estimate showed that the start and the end of the growing season are now predicted with an average accuracy of 5 and 4 days instead of 46 and 85 days as in the original model. Regarding the different sites and modeled fluxes (gross primary production, total ecosystem respiration, evapotranspiration), relative errors were between 18-60% using the original model and 10-18% using the developed model; squares of the correlation coefficients were between 0.02-0.49 using the original model and 0.50-0.81 using the developed model. (c) 2011 Elsevier B.V. All rights reserved.
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