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Author |
Lorite, I.J.; García-Vila, M.; Santos, C.; Ruiz-Ramos, M.; Fereres, E. |
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Title |
AquaData and AquaGIS: Two computer utilities for temporal and spatial simulations of water-limited yield with AquaCrop |
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Journal Article |
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Year |
2013 |
Publication |
Computers and Electronics in Agriculture |
Abbreviated Journal |
Computers and Electronics in Agriculture |
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Volume |
96 |
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Pages |
227-237 |
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Keywords |
software tool; aquacrop; crop simulation model; geographic information system; spatial aggregation; fao crop model; irrigation management; iberian peninsula; southern spain; climate models; impacts; program; europe; system |
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Abstract |
The crop simulation model AquaCrop, recently developed by FAO can be used for a wide range of purposes. However, in its present form, its use over large areas or for applications that require a large number of simulations runs (e.g., long-term analysis), is not practical without developing software to facilitate such applications. Two tools for managing the inputs and outputs of AquaCrop, named AquaData and AquaGIS, have been developed for this purpose and are presented here. Both software utilities have been programmed in Delphi v. 5 and in addition, AquaGIS requires the Geographic Information System (GIS) programming tool MapObjects. These utilities allow the efficient management of input and output files, along with a GIS module to develop spatial analysis and effect spatial visualization of the results, facilitating knowledge dissemination. A sample of application of the utilities is given here, as an AquaCrop simulation analysis of impact of climate change on wheat yield in Southern Spain, which requires extensive input data preparation and output processing. The use of AquaCrop without the two utilities would have required approximately 1000 h of work, while the utilization of AquaData and AquaGIS reduced that time by more than 99%. Furthermore, the use of GIS, made it possible to perform a spatial analysis of the results, thus providing a new option to extend the use of the AquaCrop model to scales requiring spatial and temporal analyses. (C) 2013 Elsevier B.V. All rights reserved. |
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0168-1699 |
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CropM |
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MA @ admin @ |
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4609 |
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Author |
Van Oosten, M.J.; Sharkhuu, A.; Batelli, G.; Bressan, R.A.; Maggio, A. |
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Title |
The Arabidopsis thaliana mutant air1 implicates SOS3 in the regulation of anthocyanins under salt stress |
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Journal Article |
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Year |
2013 |
Publication |
Plant Molecular Biology |
Abbreviated Journal |
Plant Mol. Biol. |
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Volume |
83 |
Issue |
4-5 |
Pages |
405-415 |
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Keywords |
Anthocyanins/analysis/*metabolism; Arabidopsis/drug effects/*genetics/physiology/radiation effects; Arabidopsis Proteins/*genetics/metabolism; Basic-Leucine Zipper Transcription Factors/*genetics/metabolism; Flavonoids/metabolism; *Gene Expression Regulation, Plant; Light; Mutagenesis, Insertional; Phenotype; Plant Roots/drug effects/genetics/physiology/radiation effects; Plant Shoots/drug effects/genetics/physiology/radiation effects; Real-Time Polymerase Chain Reaction; Sodium Chloride/pharmacology; Stress, Physiological |
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Abstract |
The accumulation of anthocyanins in plants exposed to salt stress has been largely documented. However, the functional link and regulatory components underlying the biosynthesis of these molecules during exposure to stress are largely unknown. In a screen of second site suppressors of the salt overly sensitive3-1 (sos3-1) mutant, we isolated the anthocyanin-impaired-response-1 (air1) mutant. air1 is unable to accumulate anthocyanins under salt stress, a key phenotype of sos3-1 under high NaCl levels (120 mM). The air1 mutant showed a defect in anthocyanin production in response to salt stress but not to other stresses such as high light, low phosphorous, high temperature or drought stress. This specificity indicated that air1 mutation did not affect anthocyanin biosynthesis but rather its regulation in response to salt stress. Analysis of this mutant revealed a T-DNA insertion at the first exon of an Arabidopsis thaliana gene encoding for a basic region-leucine zipper transcription factor. air1 mutants displayed higher survival rates compared to wild-type in oxidative stress conditions, and presented an altered expression of anthocyanin biosynthetic genes such as F3H, F3’H and LDOX in salt stress conditions. The results presented here indicate that AIR1 is involved in the regulation of various steps of the flavonoid and anthocyanin accumulation pathways and is itself regulated by the salt-stress response signalling machinery. The discovery and characterization of AIR1 opens avenues to dissect the connections between abiotic stress and accumulation of antioxidants in the form of flavonoids and anthocyanins. |
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0167-4412 1573-5028 |
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CropM |
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MA @ admin @ |
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4616 |
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Author |
Saetnan, E.R.; Kipling, R.P. |
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Title |
Evaluating a European knowledge hub on climate change in agriculture: Are we building a better connected community |
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Journal Article |
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Year |
2016 |
Publication |
Scientometrics |
Abbreviated Journal |
Scientometrics |
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109 |
Issue |
2 |
Pages |
1057-1074 |
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Keywords |
Agriculture; Climate change; Interdisciplinary collaboration; Co-authorship; networks; EU research policy; Collaborative funding initiatives; Knowledge hub |
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In order to maintain food security and sustainability of production under climate change, interdisciplinary and international collaboration in research is essential. In the EU, knowledge hubs are important funding instruments for the development of an interconnected European Research Area. Here, network analysis was used to assess whether the pilot knowledge hub MACSUR has affected interdisciplinary collaboration, using co-authorship of peer reviewed articles as a measure of collaboration. The broad community of all authors identified as active in the field of agriculture and climate change was increasingly well connected over the period studied. Between knowledge hub members, changes in network parameters suggest an increase in collaborative interaction beyond that expected due to network growth, and greater than that found in the broader community. Given that interdisciplinary networks often take several years to have an impact on research outputs, these changes within the relatively new MACSUR community provide evidence that the knowledge hub structure has been effective in stimulating collaboration. However, analysis showed that knowledge hub partners were initially well-connected, suggesting that the initiative may have gathered together researchers with particular resources or inclinations towards collaborative working. Long term, consistent funding and ongoing reflection to improve networking structures may be necessary to sustain the early positive signs from MACSUR, to extend its success to a wider community of researchers, or to repeat it in less connected fields of science. Tackling complex challenges such as climate change will require research structures that can effectively support and utilise the diversity of talents beyond the already well-connected core of scientists at major research institutes. But network research shows that this core, well-connected group are vital brokers in achieving wider integration. |
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0138-9130 1588-2861 |
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LiveM |
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LiveM; wos; ft=macsur; macsur-text; wsnotyet |
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MA @ admin @ |
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4760 |
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Yang, H.; Dobbie, S.; Ramirez-Villegas, J.; Feng, K.; Challinor, A.J.; Chen, B.; Gao, Y.; Lee, L.; Yin, Y.; Sun, L.; Watson, J.; Koehler, A.-K.; Fan, T.; Ghosh, S. |
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Title |
Potential negative consequences of geoengineering on crop production: A study of Indian groundnut |
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Journal Article |
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Year |
2016 |
Publication |
Geophysical Research Letters |
Abbreviated Journal |
Geophys. Res. Let. |
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Volume |
43 |
Issue |
22 |
Pages |
11786-11795 |
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Keywords |
Mangrove Tidal Creek; Land-Ocean Boundary; Carbon-Dioxide; Organic-Matter; River Estuary; European Estuaries; CO2 Fluxes; NE Coast; Water; Bay; fCO(2) (water); air-water CO2 flux; Hugli Estuary; Matla Estuary; Blue Carbon; source of CO2 |
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Geoengineering has been proposed to stabilize global temperature, but its impacts on crop production and stability are not fully understood. A few case studies suggest that certain crops are likely to benefit from solar dimming geoengineering, yet we show that geoengineering is projected to have detrimental effects for groundnut. Using an ensemble of crop-climate model simulations, we illustrate that groundnut yields in India undergo a statistically significant decrease of up to 20% as a result of solar dimming geoengineering relative to RCP4.5. It is somewhat reassuring, however, to find that after a sustained period of 50 years of geoengineering crop yields return to the nongeoengineered values within a few years once the intervention is ceased. |
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2017-01-20 |
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0094-8276 |
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CropM, ft_MACSUR |
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MA @ admin @ |
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4936 |
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Author |
Sanz-Cobena, A.; García-Marco, S.; Quemada, M.; Gabriel, J.L.; Almendros, P.; Vallejo, A. |
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Title |
Do cover crops enhance N2O, CO2 or CH4 emissions from soil in Mediterranean arable systems? |
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Journal Article |
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2014 |
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Science of the Total Environment |
Abbreviated Journal |
Science of the Total Environment |
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466-467 |
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164-174 |
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Agriculture/*methods; Air Pollutants/*metabolism; Brassica napus/growth & development/metabolism; Crops, Agricultural/growth & development/*metabolism; Gases/metabolism; Greenhouse Effect; Hordeum/growth & development/metabolism; Manure/*analysis; Nitrogen/metabolism; Nitrogen Dioxide/metabolism; Spain; Vicia/growth & development/metabolism; Zea mays/growth & development; Cover crops; GHG emissions; Green manure; Irrigation; Maize |
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This study evaluates the effect of planting three cover crops (CCs) (barley, Hordeum vulgare L.; vetch, Vicia villosa L.; rape, Brassica napus L.) on the direct emission of N(2)O, CO(2) and CH(4) in the intercrop period and the impact of incorporating these CCs on the emission of greenhouse gas (GHG) from the forthcoming irrigated maize (Zea mays L.) crop. Vetch and barley were the CCs with the highest N(2)O and CO(2) losses (75 and 47% increase compared with the control, respectively) in the fallow period. In all cases, fluxes of N(2)O were increased through N fertilization and the incorporation of barley and rape residues (40 and 17% increase, respectively). The combination of a high C:N ratio with the addition of an external source of mineral N increased the fluxes of N(2)O compared with -Ba and -Rp. The direct emissions of N(2)O were lower than expected for a fertilized crop (0.10% emission factor, EF) compared with other studies and the IPCC EF. These results are believed to be associated with a decreased NO(3)(-) pool due to highly denitrifying conditions and increased drainage. The fluxes of CO(2) were in the range of other fertilized crops (i.e., 1118.71-1736.52 kg CO(2)-Cha(-1)). The incorporation of CC residues enhanced soil respiration in the range of 21-28% for barley and rape although no significant differences between treatments were detected. Negative CH(4) fluxes were measured and displayed an overall sink effect for all incorporated CC (mean values of -0.12 and -0.10 kg CH(4)-Cha(-1) for plots with and without incorporated CCs, respectively). |
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0048-9697 |
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MA @ admin @ |
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4639 |
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