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Martre, P., He, J., Le Gouis, J., & Semenov, M. A. (2015). In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management. J. Experim. Bot., 66(12), 3581–3598.
Abstract: Genetic improvement of grain yield (GY) and grain protein concentration (GPC) is impeded by large genotype×environment×management interactions and by compensatory effects between traits. Here global uncertainty and sensitivity analyses of the process-based wheat model SiriusQuality2 were conducted with the aim of identifying candidate traits to increase GY and GPC. Three contrasted European sites were selected and simulations were performed using long-term weather data and two nitrogen (N) treatments in order to quantify the effect of parameter uncertainty on GY and GPC under variable environments. The overall influence of all 75 plant parameters of SiriusQuality2 was first analysed using the Morris method. Forty-one influential parameters were identified and their individual (first-order) and total effects on the model outputs were investigated using the extended Fourier amplitude sensitivity test. The overall effect of the parameters was dominated by their interactions with other parameters. Under high N supply, a few influential parameters with respect to GY were identified (e.g. radiation use efficiency, potential duration of grain filling, and phyllochron). However, under low N, >10 parameters showed similar effects on GY and GPC. All parameters had opposite effects on GY and GPC, but leaf and stem N storage capacity appeared as good candidate traits to change the intercept of the negative relationship between GY and GPC. This study provides a system analysis of traits determining GY and GPC under variable environments and delivers valuable information to prioritize model development and experimental work.
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Lehtonen, H. (2015). Evaluating adaptation and the production development of Finnish agriculture in climate and global change. Agricultural and Food Science, 24(3), 219–234.
Abstract: Agricultural product prices and policies influence the development of crop yields under climate change through farm level management decisions. On this basis, five main scenarios were specified for agricultural commodity prices and crop yields. An economic agricultural sector model was used in order to assess the impacts of the scenarios on production, land use and farm income in Finland. The results suggest that falling crop yields, if realized due to low prices and restrictive policies, will result in decreasing crop and livestock production and increasing nutrient surplus. Slowly increasing crop yields could stabilise production and increase farm income. Significantly higher crop prices and yields are required, however, for any marked increase in production in Finland. Cereals production would increase relatively more than livestock production, if there were high prices for agricultural products. This is explained by abundant land resources, a high opportunity cost of labour and policies maintaining current dairy and beef production.
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De Pascale, S., Orsini, F., Caputo, R., Palermo, M. A., Barbieri, G., & Maggio, A. (2012). Seasonal and multiannual effects of salinisation on tomato yield and fruit quality. Functional Plant Biology, 39(8), 689–698.
Abstract: The effects of short-and long-term salinisation were studied by comparing tomato growth on a soil exposed to one-season salinisation (short term) vs growth on a soil exposed to >20 years salinisation (long term). Remarkable differences were associated to substantial modifications of the soil physical-chemical characteristics in the root zone, including deteriorated structure, reduced infiltration properties and increased pH. Fresh yield, fruit number and fruit weight were similarly affected by short-and long-term salinisation. In contrast, the marketable yield was significantly lower in the long-term salinised soil-a response that was also associated to nutritional imbalance (mainly referred to P and K). As reported for plants growing under oxygen deprivation stress, the antioxidant capacity of the water soluble fraction of salinised tomato fruits was enhanced by short-term salinisation, also. Overall, long-term salinisation may cause physiological imbalances and yield reductions that cannot be solely attributed to hyperosmotic stress and ionic toxicity. Therefore, the ability of plants to cope with nutritional deficiency and withstand high pH and anoxia may be important traits that should be considered to improve plant tolerance to long-term salinised soils.
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Ventrella, D., Charfeddine, M., Moriondo, M., Rinaldi, M., & Bindi, M. (2012). Agronomic adaptation strategies under climate change for winter durum wheat and tomato in southern Italy: irrigation and nitrogen fertilization. Reg Environ Change, 12(3), 407–419.
Abstract: Agricultural crops are affected by climate change due to the relationship between crop development, growth, yield, CO2 atmospheric concentration and climate conditions. In particular, the further reduction in existing limited water resources combined with an increase in temperature may result in higher impacts on agricultural crops in the Mediterranean area than in other regions. In this study, the cropping system models CERES-Wheat and CROPGRO-Tomato of the Decision Support System for Agrotechnology Transfer (DSSAT) were used to analyse the response of winter durum wheat (Triticum aestivum L.) and tomato (Lycopersicon esculentum Mill.) crops to climate change, irrigation and nitrogen fertilizer managements in one of most productive areas of Italy (i.e. Capitanata, Puglia). For this analysis, three climatic datasets were used: (1) a single dataset (50 km x 50 km) provided by the JRC European centre for the period 1975-2005; two datasets from HadCM3 for the IPCC A2 GHG scenario for time slices with +2A degrees C (centred over 2030-2060) and +5A degrees C (centred over 2070-2099), respectively. All three datasets were used to generate synthetic climate series using a weather simulator (model LARS-WG). Adaptation strategies, such as irrigation and N fertilizer managements, have been investigated to either avoid or at least reduce the negative impacts induced by climate change impacts for both crops. Warmer temperatures were primarily shown to accelerate wheat and tomato phenology, thereby resulting in decreased total dry matter accumulation for both tomato and wheat under the +5A degrees C future climate scenario. Under the +2A degrees C scenario, dry matter accumulation and resulting yield were also reduced for tomato, whereas no negative yield effects were observed for winter durum wheat. In general, limiting the global mean temperature change of 2A degrees C, the application of adaptation strategies (irrigation and nitrogen fertilization) showed a positive effect in minimizing the negative impacts of climate change on productivity of tomato cultivated in southern Italy.
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Mansouri, M., & Destain, M. - F. (2015). Predicting biomass and grain protein content using Bayesian methods. Stoch. Environ. Res. Risk Assess., 29(4), 1167–1177.
Abstract: This paper deals with the problem of predicting biomass and grain protein content using improved particle filtering (IPF) based on minimizing the Kullback-Leibler divergence. The performances of IPF are compared with those of the conventional particle filtering (PF) in two comparative studies. In the first one, we apply IPF and PF at a simple dynamic crop model with the aim to predict a single state variable, namely the winter wheat biomass, and to estimate several model parameters. In the second study, the proposed IPF and the PF are applied to a complex crop model (AZODYN) to predict a winter-wheat quality criterion, namely the grain protein content. The results of both comparative studies reveal that the IPF method provides a better estimation accuracy than the PF method. The benefit of the IPF method lies in its ability to provide accuracy related advantages over the PF method since, unlike the PF which depends on the choice of the sampling distribution used to estimate the posterior distribution, the IPF yields an optimum choice of this sampling distribution, which also utilizes the observed data. The performance of the proposed method is evaluated in terms of estimation accuracy, root mean square error, mean absolute error and execution times.
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