| Records |
| Author |
van Bussel, L.G.J.; Stehfest, E.; Siebert, S.; Müller, C.; Ewert, F. |
| Title |
Simulation of the phenological development of wheat and maize at the global scale |
Type |
Journal Article |
| Year |
2015 |
Publication |
Global Ecology and Biogeography |
Abbreviated Journal |
Glob. Ecol. Biogeogr. |
| Volume |
24 |
Issue |
9 |
Pages  |
1018-1029 |
| Keywords |
Agricultural management; crop calendars; cultivar; variety characteristics; global crop modelling; global harvest dates; phenology; climate-change; winter-wheat; annual crops; photoperiod sensitivity; geographical variation; temperature; responses; adaptation; cultivars; model |
| Abstract |
AimTo derive location-specific parameters that reflect the geographic differences among cultivars in vernalization requirements, sensitivity to day length (photoperiod) and temperature, which can be used to simulate the phenological development of wheat and maize at the global scale. LocationGlobal. Methods Based on crop calendar observations and literature describing the large-scale patterns of phenological characteristics of cultivars, we developed algorithms to compute location-specific parameters to represent this large-scale pattern. Vernalization requirements were related to the duration and coldness of winter, sensitivity to day length was assumed to be represented by the minimum and maximum day lengths occurring at a location, and sensitivity to temperature was related to temperature conditions during the vegetative development phase of the crop. Results Application of the derived location-specific parameters resulted in high agreement between simulated and observed lengths of the cropping period. Agreement was especially high for wheat, with mean absolute errors of less than 3 weeks. In the main maize cropping regions, cropping periods were over- and underestimated by 0.5-1.5 months. We also found that interannual variability in simulated wheat harvest dates was more realistic when accounting for photoperiod effects. Main conclusions The methodology presented here provides a good basis for modelling the phenological characteristics of cultivars at the global scale. We show that current global patterns of growing season length as described in cropping calendars can be largely reproduced by phenology models if location-specific parameters are derived from temperature and day length indicators. Growing seasons can be modelled more accurately for wheat than for maize, especially in warm regions. Our method for computing parameters for phenology models from temperature and day length offers opportunities to improve the simulation of crop productivity by crop simulation models developed for large spatial areas and for long-term climate impact projections that account for adaptation in the selection of varieties |
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1466-822x |
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CropM, ft_macsur |
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MA @ admin @ |
Serial |
4729 |
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Bernabucci, U.; Biffani, S.; Buggiotti, L.; Vitali, A.; Lacetera, N.; Nardone, A. |
| Title |
The effects of heat stress in Italian Holstein dairy cattle |
Type |
Journal Article |
| Year |
2014 |
Publication |
Journal of Dairy Science |
Abbreviated Journal |
J. Dairy Sci. |
| Volume |
97 |
Issue |
1 |
Pages |
471-486 |
| Keywords |
Animals; Breeding; Cattle; Dietary Fats/analysis; Dietary Proteins/analysis; Female; Genetic Variation; Heat Stress Disorders/*veterinary; *Hot Temperature; Humans; Humidity; *Lactation; Linear Models; Milk/chemistry; Parity; Phenotype; Weather; dairy cow; heritability; production trait; temperature-humidity index breaking point |
| Abstract |
The data set for this study comprised 1,488,474 test-day records for milk, fat, and protein yields and fat and protein percentages from 191,012 first-, second-, and third-parity Holstein cows from 484 farms. Data were collected from 2001 through 2007 and merged with meteorological data from 35 weather stations. A linear model (M1) was used to estimate the effects of the temperature-humidity index (THI) on production traits. Least squares means from M1 were used to detect the THI thresholds for milk production in all parities by using a 2-phase linear regression procedure (M2). A multiple-trait repeatability test-model (M3) was used to estimate variance components for all traits and a dummy regression variable (t) was defined to estimate the production decline caused by heat stress. Additionally, the estimated variance components and M3 were used to estimate traditional and heat-tolerance breeding values (estimated breeding values, EBV) for milk yield and protein percentages at parity 1. An analysis of data (M2) indicated that the daily THI at which milk production started to decline for the 3 parities and traits ranged from 65 to 76. These THI values can be achieved with different temperature/humidity combinations with a range of temperatures from 21 to 36°C and relative humidity values from 5 to 95%. The highest negative effect of THI was observed 4 d before test day over the 3 parities for all traits. The negative effect of THI on production traits indicates that first-parity cows are less sensitive to heat stress than multiparous cows. Over the parities, the general additive genetic variance decreased for protein content and increased for milk yield and fat and protein yield. Additive genetic variance for heat tolerance showed an increase from the first to third parity for milk, protein, and fat yield, and for protein percentage. Genetic correlations between general and heat stress effects were all unfavorable (from -0.24 to -0.56). Three EBV per trait were calculated for each cow and bull (traditional EBV, traditional EBV estimated with the inclusion of THI covariate effect, and heat tolerance EBV) and the rankings of EBV for 283 bulls born after 1985 with at least 50 daughters were compared. When THI was included in the model, the ranking for 17 and 32 bulls changed for milk yield and protein percentage, respectively. The heat tolerance genetic component is not negligible, suggesting that heat tolerance selection should be included in the selection objectives. |
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1525-3198 (Electronic) 0022-0302 (Linking) |
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LiveM, ft_macsur |
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MA @ admin @ |
Serial |
4617 |
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Van Oosten, M.J.; Sharkhuu, A.; Batelli, G.; Bressan, R.A.; Maggio, A. |
| Title |
The Arabidopsis thaliana mutant air1 implicates SOS3 in the regulation of anthocyanins under salt stress |
Type |
Journal Article |
| Year |
2013 |
Publication |
Plant Molecular Biology |
Abbreviated Journal |
Plant Mol. Biol. |
| Volume |
83 |
Issue |
4-5 |
Pages |
405-415 |
| Keywords |
Anthocyanins/analysis/*metabolism; Arabidopsis/drug effects/*genetics/physiology/radiation effects; Arabidopsis Proteins/*genetics/metabolism; Basic-Leucine Zipper Transcription Factors/*genetics/metabolism; Flavonoids/metabolism; *Gene Expression Regulation, Plant; Light; Mutagenesis, Insertional; Phenotype; Plant Roots/drug effects/genetics/physiology/radiation effects; Plant Shoots/drug effects/genetics/physiology/radiation effects; Real-Time Polymerase Chain Reaction; Sodium Chloride/pharmacology; Stress, Physiological |
| Abstract |
The accumulation of anthocyanins in plants exposed to salt stress has been largely documented. However, the functional link and regulatory components underlying the biosynthesis of these molecules during exposure to stress are largely unknown. In a screen of second site suppressors of the salt overly sensitive3-1 (sos3-1) mutant, we isolated the anthocyanin-impaired-response-1 (air1) mutant. air1 is unable to accumulate anthocyanins under salt stress, a key phenotype of sos3-1 under high NaCl levels (120 mM). The air1 mutant showed a defect in anthocyanin production in response to salt stress but not to other stresses such as high light, low phosphorous, high temperature or drought stress. This specificity indicated that air1 mutation did not affect anthocyanin biosynthesis but rather its regulation in response to salt stress. Analysis of this mutant revealed a T-DNA insertion at the first exon of an Arabidopsis thaliana gene encoding for a basic region-leucine zipper transcription factor. air1 mutants displayed higher survival rates compared to wild-type in oxidative stress conditions, and presented an altered expression of anthocyanin biosynthetic genes such as F3H, F3’H and LDOX in salt stress conditions. The results presented here indicate that AIR1 is involved in the regulation of various steps of the flavonoid and anthocyanin accumulation pathways and is itself regulated by the salt-stress response signalling machinery. The discovery and characterization of AIR1 opens avenues to dissect the connections between abiotic stress and accumulation of antioxidants in the form of flavonoids and anthocyanins. |
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0167-4412 1573-5028 |
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CropM |
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MA @ admin @ |
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4616 |
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Walkiewicz, A.; Bulak, P.; Brzezinska, M.; Wnuk, E.; Bieganowski, A. |
| Title |
Methane oxidation in heavy metal contaminated Mollic Gleysol under oxic and hypoxic conditions |
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Journal Article |
| Year |
2016 |
Publication |
Environmental Pollution |
Abbreviated Journal |
Environ. Pollut. |
| Volume |
213 |
Issue |
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Pages |
403-411 |
| Keywords |
Soil; Methane oxidation; CH4; Heavy metals; Oxygen status; Dehydrogenase; activity; methanotrophic bacteria; dehydrogenase-activity; potential activity; forest soils; responses; landfill; community; ch4; co2; bioremediation |
| Abstract |
Soils are the largest terrestrial sink for methane (CH4). However, heavy metals may exert toxicity to soil microorganisms, including methanotrophic bacteria. We tested the effect of lead (Pb), zinc (Zn) and nickel (Ni) on CH4 oxidation (1% v/v) and dehydrogenase activity, an index of the activity of the total soil microbial community in Mollic Gleysol soil in oxic and hypoxic conditions (oxia and hypoxia, 20% and 10% v/v O2, respectively). Metals were added in doses corresponding to the amounts permitted of Pb, Zn, Ni in agricultural soils (60, 120, 35 mg kg(-1), respectively), and half and double of these doses. Relatively low metal contents and O2 status reflect the conditions of most agricultural soils of temperate regions. Methane consumption showed high tolerance to heavy metals. The effect of O2 status was stronger than that of metals. CH4 consumption was enhanced under hypoxia, where both the start and the completion of the control and contaminated treatment were faster than under oxic conditions. Dehydrogenase activity, showed higher sensitivity to the contamination (except for low Ni dose), with a stronger effect of heavy metals, than that of the O2 status. |
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Newsletter July 2016 |
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0269-7491 |
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CropM, ft_macsur |
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MA @ admin @ |
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4771 |
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Eza, U.; Shtiliyanova, A.; Borras, D.; Bellocchi, G.; Carrère, P.; Martin, R. |
| Title |
An open platform to assess vulnerabilities to climate change: An application to agricultural systems |
Type |
Journal Article |
| Year |
2015 |
Publication |
Ecological Informatics |
Abbreviated Journal |
Ecological Informatics |
| Volume |
30 |
Issue |
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389-396 |
| Keywords |
climate change; grasslands; modeling platform; vulnerability assessment; pasture simulation-model; software component; solar-radiation; crop production; change impacts; adaptation; indicator; makers |
| Abstract |
Numerous climate futures are now available from global climate models. Translation of climate data such as precipitation and temperatures into ecologically meaningful outputs for managers and planners is the next frontier. We describe a model-based open platform to assess vulnerabilities of agricultural systems to climate change on pixel-wise data. The platform includes a simulation modeling engine and is suited to work with NetCDF format of input and output files. In a case study covering a region (Auvergne) in the Massif Central of France, the platform is configured to characterize climate (occurrence of arid conditions in historical and projected climate records), soils and human management, and is then used to assess the vulnerability to climate change of grassland productivity (downscaled to a fine scale). We demonstrate how using climate time series, and process-based simulations vulnerabilities can be defined at fine spatial scales relevant to farmers and land managers, and can be incorporated into management frameworks. (C) 2015 Elsevier B.V. All rights reserved. |
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1574-9541 |
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CropM LiveM, ft_macsur |
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MA @ admin @ |
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4708 |
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