| Records |
| Author |
Klosterhalfen, A.; Herbst, M.; Weihermueller, L.; Graf, A.; Schmidt, M.; Stadler, A.; Schneider, K.; Subke, J.-A.; Huisman, J.A.; Vereecken, H. |
| Title |
Multi-site calibration and validation of a net ecosystem carbon exchange model for croplands |
Type |
Journal Article |
| Year |
2017 |
Publication |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
| Volume |
363 |
Issue |
|
Pages  |
137-156 |
| Keywords |
AgroC; Soil respiration; Carbon balance; Winter wheat; Grassland; NEE; LOLIUM-PERENNE L; SOIL HETEROTROPHIC RESPIRATION; LAND-SURFACE MODELS; EDDY-COVARIANCE; WINTER-WHEAT; CARBOHYDRATE CONTENT; TURNOVER MODEL; ROTHC MODEL; ROOT RATIOS; CO2 EFFLUX |
| Abstract |
Croplands play an important role in the carbon budget of many regions. However, the estimation of their carbon balance remains difficult due to diversity and complexity of the processes involved. We report the coupling of a one-dimensional soil water, heat, and CO2 flux model (SOILCO2), a pool concept of soil carbon turnover (RothC), and a crop growth module (SUCROS) to predict the net ecosystem exchange (NEE) of carbon. The coupled model, further referred to as AgroC, was extended with routines for managed grassland as well as for root exudation and root decay. In a first step, the coupled model was applied to two winter wheat sites and one upland grassland site in Germany. The model was calibrated based on soil water content, soil temperature, biometric, and soil respiration measurements for each site, and validated in terms of hourly NEE measured with the eddy covariance technique. The overall model performance of AgroC was sufficient with a model efficiency above 0.78 and a correlation coefficient above 0.91 for NEE. In a second step, AgroC was optimized with eddy covariance NEE measurements to examine the effect of different objective functions, constraints, and data-transformations on estimated NEE. It was found that NEE showed a distinct sensitivity to the choice of objective function and the inclusion of soil respiration data in the optimization process. In particular, both positive and negative day- and nighttime fluxes were found to be sensitive to the selected optimization strategy. Additional consideration of soil respiration measurements improved the simulation of small positive fluxes remarkably. Even though the model performance of the selected optimization strategies did not diverge substantially, the resulting cumulative NEE over simulation time period differed substantially. Therefore, it is concluded that data transformations, definitions of objective functions, and data sources have to be considered cautiously when a terrestrial ecosystem model is used to determine NEE by means of eddy covariance measurements. (C) 2017 Elsevier B.V. All rights reserved. |
| Address |
2017-11-09 |
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| Language |
English |
Summary Language |
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Series Title |
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Series Issue |
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Edition |
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| ISSN |
0304-3800 |
ISBN |
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| Notes |
CropM, ft_MACSUR |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
5216 |
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| Author |
Dumont, B.; Leemans, V.; Mansouri, M.; Bodson, B.; Destain, J.-P.; Destain, M.-F. |
| Title |
Parameter identification of the STICS crop model, using an accelerated formal MCMC approach |
Type |
Journal Article |
| Year |
2014 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
| Volume |
52 |
Issue |
|
Pages |
121-135 |
| Keywords |
crop model; parameter estimation; bayes; stics; dream; global sensitivity-analysis; simulation-model; nitrogen balances; bayesian-approach; generic model; wheat; prediction; water; optimization; algorithm |
| Abstract |
This study presents a Bayesian approach for the parameters’ identification of the STICS crop model based on the recently developed Differential Evolution Adaptive Metropolis (DREAM) algorithm. The posterior distributions of nine specific crop parameters of the STICS model were sampled with the aim to improve the growth simulations of a winter wheat (Triticum aestivum L) culture. The results obtained with the DREAM algorithm were initially compared to those obtained with a Nelder-Mead Simplex algorithm embedded within the OptimiSTICS package. Then, three types of likelihood functions implemented within the DREAM algorithm were compared, namely the standard least square, the weighted least square, and a transformed likelihood function that makes explicit use of the coefficient of variation (CV). The results showed that the proposed CV likelihood function allowed taking into account both noise on measurements and heteroscedasticity which are regularly encountered in crop modelling. (C) 2013 Elsevier Ltd. All rights reserved. |
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English |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
1364-8152 |
ISBN |
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Medium |
Article |
| Area |
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Expedition |
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Conference |
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| Notes |
CropM |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4520 |
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| Author |
Hidy, D.; Barcza, Z.; Haszpra, L.; Churkina, G.; Pintér, K.; Nagy, Z. |
| Title |
Development of the Biome-BGC model for simulation of managed herbaceous ecosystems |
Type |
Journal Article |
| Year |
2012 |
Publication |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
| Volume |
226 |
Issue |
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Pages |
99-119 |
| Keywords |
biogeochemical model; biome-bgc; grassland; management; soil moisture; bayesian calibration; carbon flux model; regional applications; bayesian calibration; use efficiency; general-model; exchange; balance; climate; grassland; variability |
| Abstract |
Apart from measurements, numerical models are the most convenient instruments to analyze the carbon and water balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based Biome-BGC model is widely used to simulate the storage and flux of water, carbon, and nitrogen within the vegetation, litter, and soil of unmanaged terrestrial ecosystems. Considering herbaceous vegetation related simulations with Biome-BGC, soil moisture and growing season control on ecosystem functioning is inaccurate due to the simple soil hydrology and plant phenology representation within the model. Consequently, Biome-BGC has limited applicability in herbaceous ecosystems because (1) they are usually managed; (2) they are sensitive to soil processes, most of all hydrology; and (3) their carbon balance is closely connected with the growing season length. Our aim was to improve the applicability of Biome-BGC for managed herbaceous ecosystems by implementing several new modules, including management. A new index (heatsum growing season index) was defined to accurately estimate the first and the final days of the growing season. Instead of a simple bucket soil sub-model, a multilayer soil sub-model was implemented, which can handle the processes of runoff, diffusion and percolation. A new module was implemented to simulate the ecophysiological effect of drought stress on plant mortality. Mowing and grazing modules were integrated in order to quantify the functioning of managed ecosystems. After modifications, the Biome-BGC model was calibrated and validated using eddy covariance-based measurement data collected in Hungarian managed grassland ecosystems. Model calibration was performed based on the Bayes theorem. As a result of these developments and calibration, the performance of the model was substantially improved. Comparison with measurement-based estimate showed that the start and the end of the growing season are now predicted with an average accuracy of 5 and 4 days instead of 46 and 85 days as in the original model. Regarding the different sites and modeled fluxes (gross primary production, total ecosystem respiration, evapotranspiration), relative errors were between 18-60% using the original model and 10-18% using the developed model; squares of the correlation coefficients were between 0.02-0.49 using the original model and 0.50-0.81 using the developed model. (c) 2011 Elsevier B.V. All rights reserved. |
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English |
Summary Language |
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Series Title |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
0304-3800 |
ISBN |
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Article |
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Expedition |
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Conference |
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| Notes |
LiveM |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4472 |
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| Author |
Sándor, R.; Ma, S.; Acutis, M.; Barcza, Z.; Ben Touhami, H.; Doro, L.; Hidy, D.; Köchy, M.; Lellei-Kovács, E.; Minet, J.; Perego, A.; Rolinski, S.; Ruget, F.; Seddaiu, G.; Wu, L.; Bellocchi, G. |
| Title |
Uncertainty in simulating biomass yield and carbon–water fluxes from grasslands under climate change |
Type |
Journal Article |
| Year |
2015 |
Publication |
Advances in Animal Biosciences |
Abbreviated Journal |
Advances in Animal Biosciences |
| Volume |
6 |
Issue |
01 |
Pages |
49-51 |
| Keywords |
grassland productivity; carbon balance; model simulation; uncertainty; sensitivity |
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English |
Summary Language |
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Original Title |
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Series Title |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
2040-4700 |
ISBN |
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Medium |
Article |
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Expedition |
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Conference |
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| Notes |
CropM, LiveM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4651 |
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| Author |
Korhonen, P.; Palosuo, T.; Persson, T.; Höglind, M.; Jego, G.; Van Oijen, M.; Gustavsson, A.-M.; Belanger, G.; Virkajärvi, P. |
| Title |
Modelling grass yields in northern climates – a comparison of three growth models for timothy |
Type |
Journal Article |
| Year |
2018 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
| Volume |
224 |
Issue |
|
Pages |
37-47 |
| Keywords |
Forage grass; Model comparison; Timothy; Uncertainty; Yield; Nutritive-Value; Catimo Model; Nitrogen Balances; Simulation; Regrowth; Wheat; Stics; Dynamics; Harvest; Water |
| Abstract |
During the past few years, several studies have compared the performance of crop simulation models to assess the uncertainties in model-based climate change impact assessments and other modelling studies. Many of these studies have concentrated on cereal crops, while fewer model comparisons have been conducted for grasses. We compared the predictions for timothy grass (Phleum pratertse L.) yields for first and second cuts along with the dynamics of above-ground biomass for the grass simulation models BASGRA and CATIMO, and the soil -crop model STICS. The models were calibrated and evaluated using field data from seven sites across Northern Europe and Canada with different climates, soil conditions and management practices. Altogether the models were compared using data on timothy grass from 33 combinations of sites, cultivars and management regimes. Model performances with two calibration approaches, cultivar-specific and generic calibrations, were compared. All the models studied estimated the dynamics of above-ground biomass and the leaf area index satisfactorily, but tended to underestimate the first cut yield. Cultivar-specific calibration resulted in more accurate first cut yield predictions than the generic calibration achieving root mean square errors approximately one third lower for the cultivar-specific calibration. For the second cut, the difference between the calibration methods was small. The results indicate that detailed soil process descriptions improved the overall model performance and the model responses to management, such as nitrogen applications. The results also suggest that taking the genetic variability into account between cultivars of timothy grass also improves the yield estimates. Calibrations using both spring and summer growth data simultaneously revealed that processes determining the growth in these two periods require further attention in model development. |
| Address |
2018-07-12 |
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Thesis |
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Place of Publication |
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English |
Summary Language |
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Original Title |
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Series Title |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
0378-4290 |
ISBN |
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Medium |
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Conference |
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| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
5206 |
| Permanent link to this record |
