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Mansouri, M., Dumont, B., Leemans, V., & Destain, M. - F. (2014). Bayesian methods for predicting LAI and soil water content. Precision Agric., 15(2), 184–201.
Abstract: LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.
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Constantin, J., Raynal, H., Casellas, E., Hoffman, H., Bindi, M., Doro, L., et al. (2019). Management and spatial resolution effects on yield and water balance at regional scale in crop models. Agricultural and Forest Meteorology, 275, 184–195.
Abstract: Due to the more frequent use of crop models at regional and national scale, the effects of spatial data input resolution have gained increased attention. However, little is known about the influence of variability in crop management on model outputs. A constant and uniform crop management is often considered over the simulated area and period. This study determines the influence of crop management adapted to climatic conditions and input data resolution on regional-scale outputs of crop models. For this purpose, winter wheat and maize were simulated over 30 years with spatially and temporally uniform management or adaptive management for North Rhine-Westphalia ((similar to)34 083 km(2)), Germany. Adaptive management to local climatic conditions was used for 1) sowing date, 2) N fertilization dates, 3) N amounts, and 4) crop cycle length. Therefore, the models were applied with four different management sets for each crop. Input data for climate, soil and management were selected at five resolutions, from 1 x 1 km to 100 x 100 km grid size. Overall, 11 crop models were used to predict regional mean crop yield, actual evapotranspiration, and drainage. Adaptive management had little effect (< 10% difference) on the 30-year mean of the three output variables for most models and did not depend on soil, climate, and management resolution. Nevertheless, the effect was substantial for certain models, up to 31% on yield, 27% on evapotranspiration, and 12% on drainage compared to the uniform management reference. In general, effects were stronger on yield than on evapotranspiration and drainage, which had little sensitivity to changes in management. Scaling effects were generally lower than management effects on yield and evapotranspiration as opposed to drainage. Despite this trend, sensitivity to management and scaling varied greatly among the models. At the annual scale, effects were stronger in certain years, particularly the management effect on yield. These results imply that depending on the model, the representation of management should be carefully chosen, particularly when simulating yields and for predictions on annual scale.
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Coucheney, E., Buis, S., Launay, M., Constantin, J., Mary, B., García de Cortázar-Atauri, I., et al. (2015). Accuracy, robustness and behavior of the STICS soil–crop model for plant, water and nitrogen outputs: Evaluation over a wide range of agro-environmental conditions in France. Env. Model. Softw., 64, 177–190.
Abstract: Soil-crop models are increasingly used as predictive tools to assess yield and environmental impacts of agriculture in a growing diversity of contexts. They are however seldom evaluated at a given time over a wide domain of use. We tested here the performances of the STICS model (v8.2.2) with its standard set of parameters over a dataset covering 15 crops and a wide range of agropedoclimatic conditions in France. Model results showed a good overall accuracy, with little bias. Relative RMSE was larger for soil nitrate (49%) than for plant biomass (35%) and nitrogen (33%) and smallest for soil water (10%). Trends induced by contrasted environmental conditions and management practices were well reproduced. Finally, limited dependency of model errors on crops or environments indicated a satisfactory robustness. Such performances make STICS a valuable tool for studying the effects of changes in agro-ecosystems over the domain explored. (C) 2014 Elsevier Ltd. All rights reserved.
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Zhao, G., Siebert, S., Enders, A., Rezaei, E. E., Yan, C., & Ewert, F. (2015). Demand for multi-scale weather data for regional crop modeling. Agricultural and Forest Meteorology, 200, 156–171.
Abstract: A spatial resolution needs to be determined prior to using models to simulate crop yields at a regional scale, but a dilemma exists in compromising between different demands. A fine spatial resolution demands extensive computation load for input data assembly, model runs, and output analysis. A coarse spatial resolution could result in loss of spatial detail in variability. This paper studied the impact of spatial resolution, data aggregation and spatial heterogeneity of weather data on simulations of crop yields, thus providing guidelines for choosing a proper spatial resolution for simulations of crop yields at regional scale. Using a process-based crop model SIMPLACE (LINTUL2) and daily weather data at 1 km resolution we simulated a continuous rainfed winter wheat cropping system at the national scale of Germany. Then we aggregated the weather data to four resolutions from 10 to 100 km, repeated the simulation, compared them with the 1 km results, and correlated the difference with the intra-pixel heterogeneity quantified by an ensemble of four semivariogram models. Aggregation of weather data had small effects over regions with a flat terrain located in northern Germany, but large effects over southern regions with a complex topography. The spatial distribution of yield bias at different spatial resolutions was consistent with the intra-pixel spatial heterogeneity of the terrain and a log-log linear relationship between them was established. By using this relationship we demonstrated the way to optimize the model resolution to minimize both the number of simulation runs and the expected loss of spatial detail in variability due to aggregation effects. We concluded that a high spatial resolution is desired for regions with high spatial environmental heterogeneity, and vice versa. This calls for the development of multi-scale approaches in regional and global crop modeling. The obtained results require substantiation for other production situations, crops, output variables and for different crop models. (C) 2014 Elsevier B.V. All rights reserved.
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Zhao, G., Hoffmann, H., van Bussel, L. G. J., Enders, A., Specka, X., Sosa, C., et al. (2015). Effect of weather data aggregation on regional crop simulation for different crops, production conditions, and response variables. Clim. Res., 65, 141–157.
Abstract: We assessed the weather data aggregation effect (DAE) on the simulation of cropping systems for different crops, response variables, and production conditions. Using 13 process-based crop models and the ensemble mean, we simulated 30 yr continuous cropping systems for 2 crops (winter wheat and silage maize) under 3 production conditions for the state of North Rhine-Westphalia, Germany. The DAE was evaluated for 5 weather data resolutions (i.e. 1, 10, 25, 50, and 100 km) for 3 response variables including yield, growing season evapotranspiration, and water use efficiency. Five metrics, viz. the spatial bias (Delta), average absolute deviation (AAD), relative AAD, root mean squared error (RMSE), and relative RMSE, were used to evaluate the DAE on both the input weather data and simulated results. For weather data, we found that data aggregation narrowed the spatial variability but widened the., especially across mountainous areas. The DAE on loss of spatial heterogeneity and hotspots was stronger than on the average changes over the region. The DAE increased when coarsening the spatial resolution of the input weather data. The DAE varied considerably across different models, but changed only slightly for different production conditions and crops. We conclude that if spatially detailed information is essential for local management decision, higher resolution is desirable to adequately capture the spatial variability for heterogeneous regions. The required resolution depends on the choice of the model as well as the environmental condition of the study area.
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