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Author |
Conradt, T.; Wechsung, F.; Bronstert, A. |
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Title |
Three perceptions of the evapotranspiration landscape: comparing spatial patterns from a distributed hydrological model, remotely sensed surface temperatures, and sub-basin water balances |
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Journal Article |
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Year |
2013 |
Publication |
Hydrology and Earth System Sciences |
Abbreviated Journal |
Hydrol. Earth System Sci. |
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Volume |
17 |
Issue |
7 |
Pages |
2947-2966 |
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Keywords |
senegal river-basin; data assimilation; sensing data; regional evapotranspiration; intercomparison project; environmental-models; oklahoma experiments; solar-radiation; satellite data; scale |
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Abstract |
A problem encountered by many distributed hydrological modelling studies is high simulation errors at interior gauges when the model is only globally calibrated at the outlet. We simulated river runoff in the Elbe River basin in central Europe (148 268 km(2)) with the semi-distributed eco-hydrological model SWIM (Soil and Water Integrated Model). While global parameter optimisation led to Nash-Sutcliffe efficiencies of 0.9 at the main outlet gauge, comparisons with measured runoff series at interior points revealed large deviations. Therefore, we compared three different strategies for deriving sub-basin evapotranspiration: (1) modelled by SWIM without any spatial calibration, (2) derived from remotely sensed surface temperatures, and (3) calculated from long-term precipitation and discharge data. The results show certain consistencies between the modelled and the remote sensing based evapotranspiration rates, but there seems to be no correlation between remote sensing and water balance based estimations. Subsequent analyses for single sub-basins identify amongst others input weather data and systematic error amplification in inter-gauge discharge calculations as sources of uncertainty. The results encourage careful utilisation of different data sources for enhancements in distributed hydrological modelling. |
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1607-7938 |
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CropM |
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MA @ admin @ |
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4485 |
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Van Oosten, M.J.; Sharkhuu, A.; Batelli, G.; Bressan, R.A.; Maggio, A. |
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Title |
The Arabidopsis thaliana mutant air1 implicates SOS3 in the regulation of anthocyanins under salt stress |
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Journal Article |
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Year |
2013 |
Publication |
Plant Molecular Biology |
Abbreviated Journal |
Plant Mol. Biol. |
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83 |
Issue |
4-5 |
Pages |
405-415 |
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Keywords |
Anthocyanins/analysis/*metabolism; Arabidopsis/drug effects/*genetics/physiology/radiation effects; Arabidopsis Proteins/*genetics/metabolism; Basic-Leucine Zipper Transcription Factors/*genetics/metabolism; Flavonoids/metabolism; *Gene Expression Regulation, Plant; Light; Mutagenesis, Insertional; Phenotype; Plant Roots/drug effects/genetics/physiology/radiation effects; Plant Shoots/drug effects/genetics/physiology/radiation effects; Real-Time Polymerase Chain Reaction; Sodium Chloride/pharmacology; Stress, Physiological |
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The accumulation of anthocyanins in plants exposed to salt stress has been largely documented. However, the functional link and regulatory components underlying the biosynthesis of these molecules during exposure to stress are largely unknown. In a screen of second site suppressors of the salt overly sensitive3-1 (sos3-1) mutant, we isolated the anthocyanin-impaired-response-1 (air1) mutant. air1 is unable to accumulate anthocyanins under salt stress, a key phenotype of sos3-1 under high NaCl levels (120 mM). The air1 mutant showed a defect in anthocyanin production in response to salt stress but not to other stresses such as high light, low phosphorous, high temperature or drought stress. This specificity indicated that air1 mutation did not affect anthocyanin biosynthesis but rather its regulation in response to salt stress. Analysis of this mutant revealed a T-DNA insertion at the first exon of an Arabidopsis thaliana gene encoding for a basic region-leucine zipper transcription factor. air1 mutants displayed higher survival rates compared to wild-type in oxidative stress conditions, and presented an altered expression of anthocyanin biosynthetic genes such as F3H, F3’H and LDOX in salt stress conditions. The results presented here indicate that AIR1 is involved in the regulation of various steps of the flavonoid and anthocyanin accumulation pathways and is itself regulated by the salt-stress response signalling machinery. The discovery and characterization of AIR1 opens avenues to dissect the connections between abiotic stress and accumulation of antioxidants in the form of flavonoids and anthocyanins. |
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0167-4412 1573-5028 |
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MA @ admin @ |
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4616 |
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Eza, U.; Shtiliyanova, A.; Borras, D.; Bellocchi, G.; Carrère, P.; Martin, R. |
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Title |
An open platform to assess vulnerabilities to climate change: An application to agricultural systems |
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Journal Article |
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2015 |
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Ecological Informatics |
Abbreviated Journal |
Ecological Informatics |
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30 |
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389-396 |
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climate change; grasslands; modeling platform; vulnerability assessment; pasture simulation-model; software component; solar-radiation; crop production; change impacts; adaptation; indicator; makers |
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Numerous climate futures are now available from global climate models. Translation of climate data such as precipitation and temperatures into ecologically meaningful outputs for managers and planners is the next frontier. We describe a model-based open platform to assess vulnerabilities of agricultural systems to climate change on pixel-wise data. The platform includes a simulation modeling engine and is suited to work with NetCDF format of input and output files. In a case study covering a region (Auvergne) in the Massif Central of France, the platform is configured to characterize climate (occurrence of arid conditions in historical and projected climate records), soils and human management, and is then used to assess the vulnerability to climate change of grassland productivity (downscaled to a fine scale). We demonstrate how using climate time series, and process-based simulations vulnerabilities can be defined at fine spatial scales relevant to farmers and land managers, and can be incorporated into management frameworks. (C) 2015 Elsevier B.V. All rights reserved. |
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1574-9541 |
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CropM LiveM, ft_macsur |
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MA @ admin @ |
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4708 |
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Dáder, B.; Gwynn-Jones, D.; Moreno, A.; Winters, A.; Fereres, A. |
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Impact of UV-A radiation on the performance of aphids and whiteflies and on the leaf chemistry of their host plants |
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Journal Article |
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2014 |
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Journal of Photochemistry and Photobiology B: Biology |
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J. Photochem. Photobiol. B |
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138 |
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307-316 |
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Amino Acids/analysis; Animals; Aphids/*radiation effects; Capsicum/metabolism/parasitology/radiation effects; Carbohydrates/analysis; Chromatography, High Pressure Liquid; Female; Fertility/radiation effects; Hemiptera/*radiation effects; Mass Spectrometry; Phenols/analysis/chemistry; Plant Leaves/metabolism/parasitology/radiation effects; Plants/parasitology/*radiation effects; Proteins/analysis; Solanum melongena/metabolism/parasitology/radiation effects; Time Factors; *Ultraviolet Rays; Eggplant; Insect pests; Pepper; Plant-insect interactions; UV-blocking covers |
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Ultraviolet (UV) radiation directly regulates a multitude of herbivore life processes, in addition to indirectly affecting insect success via changes in plant chemistry and morphogenesis. Here we looked at plant and insect (aphid and whitefly) exposure to supplemental UV-A radiation in the glasshouse environment and investigated effects on insect population growth. Glasshouse grown peppers and eggplants were grown from seed inside cages covered by novel plastic filters, one transparent and the other opaque to UV-A radiation. At a 10-true leaf stage for peppers (53 days) and 4-true leaf stage for eggplants (34 days), plants were harvested for chemical analysis and infested by aphids and whiteflies, respectively. Clip-cages were used to introduce and monitor the insect fitness and populations of the pests studied. Insect pre-reproductive period, fecundity, fertility and intrinsic rate of natural increase were assessed. Crop growth was monitored weekly for 7 and 12 weeks throughout the crop cycle of peppers and eggplants, respectively. At the end of the insect fitness experiment, plants were harvested (68 days and 18-true leaf stage for peppers, and 104 days and 12-true leaf stage for eggplants) and leaves analysed for secondary metabolites, soluble carbohydrates, amino acids, total proteins and photosynthetic pigments. Our results demonstrate for the first time, that UV-A modulates plant chemistry with implications for insect pests. Both plant species responded directly to UV-A by producing shorter stems but this effect was only significant in pepper whilst UV-A did not affect the leaf area of either species. Importantly, in pepper, the UV-A treated plants contained higher contents of secondary metabolites, leaf soluble carbohydrates, free amino acids and total content of protein. Such changes in tissue chemistry may have indirectly promoted aphid performance. For eggplants, chlorophylls a and b, and carotenoid levels decreased with supplemental UV-A over the entire crop cycle but UV-A exposure did not affect leaf secondary metabolites. However, exposure to supplemental UV-A had a detrimental effect on whitefly development, fecundity and fertility presumably not mediated by plant cues as compounds implied in pest nutrition – proteins and sugars – were unaltered. |
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1011-1344 |
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CropM |
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MA @ admin @ |
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4517 |
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Author |
Sanna, M.; Bellocchi, G.; Fumagalli, M.; Acutis, M. |
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A new method for analysing the interrelationship between performance indicators with an application to agrometeorological models |
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Journal Article |
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2015 |
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Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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73 |
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286-304 |
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model evaluation; performance indicators; stable correlation; solar-radiation; simulation-model; environmental-models; statistical-methods; crop nitrogen; validation; rice; uncertainty; calibration; software |
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The use of a variety of metrics is advocated to assess model performance but correlated metrics may convey the same information, thus leading to redundancy. Starting from this assumption, a method was developed for selecting, from among a collection of performance indicators, one or more subsets providing the same information as the entire set. The method, based on the definition of “stable correlation”, was applied to 23 performance indicators of agrometeorological models, calculated on large sets of simulated and observed data of four agronomic and meteorological variables: above-ground biomass, leaf area index, hourly air relative humidity and daily solar radiation. Two subsets were determined: {Squared Bias, Root Mean Squared Relative Error, Coefficient of Determination, Pattern Index, Modified Modelling Efficiency}, {Persistence Model Efficiency, Root Mean Squared Relative Error, Coefficient of Determination, Pattern Index}. The method needs corroboration but is statistically founded and can support the implementation of standardized evaluation tools. (C) 2015 Elsevier Ltd. All rights reserved. |
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1364-8152 |
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CropM LiveM, ftnotmacsur |
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MA @ admin @ |
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4503 |
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