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Jing, Q., Bélanger, G., Baron, V., Bonesmo, H., & Virkajärvi, P. (2013). Simulating the Nutritive Value of Timothy Summer Regrowth. Agronomy Journal, 105(3), 563.
Abstract: The process-based grass model, CATIMO, simulates the spring growth and nutritive value of timothy (Phleum pratense L.), a forage species widely grown in Scandinavia and Canada, but the nutritive value of the summer regrowth has never been simulated. Our objective was to improve CATIMO for simulating the N concentration, neutral detergent fiber (NDF), in vitro digestibility of NDF (dNDF), and in vitro true digestibility of dry matter (IVTD) of summer regrowth. Daily changes in summer regrowth nutritive value were simulated by modifying key crop parameters that differed from spring growth. More specifically, the partitioning fraction to leaf blades was increased to increase the leaf-to-weight ratio, and daily changes in NDF and dNDF of leaf blades and stems were reduced. The modified CATIMO model was evaluated with data from four independent experiments in eastern and western Canada and Finland. The model performed better for eastern Canada than for the other locations, but the nutritive value attributes of the summer regrowth across locations (range of normalized RMSE = 8-25%, slope < 0.17, R-2 < 0.10) were not simulated as well as those of the spring growth (range of normalized RMSE = 4-16%, 0.85 < slope < 1.07, R-2 > 0.61). These modeling results highlight knowledge gaps in timothy summer regrowth and prospective research directions: improved knowledge of factors controlling the nutritive value of the timothy summer regrowth and experimental measurements of leaf-to-weight ratio and of the nutritive value of leaves and stems.
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Van Oijen, M., & Höglind, M. (2016). Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design. Euphytica, 207(3), 627–643.
Abstract: Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway.
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Żarski, J., Dudek, S., Kuśmierek-Tomaszewska, R., Bojar, W., Knopik, L., & Żarski, W. (2014). Agroklimatologiczna ocena opadów atmosferycznych okresu wegetacyjnego w rejonie Bydgoszczy (Agro-climatological assessment of the growing season rainfall in the Bydgoszcz region). Infrastruktura i Ekologia Terenów Wiejskich (Infrastructure and Ecology of Rural Areas), Ii(3), 643–656.
Abstract: The aim of the research was an agro-climatologic assessment of the amount of rainfall on a local scale, mainly aimed to identify trends in their changes and a possible rise in their variability over time. In the studies also we wanted to demonstrate the impact of the amount of rainfall in the region of Bydgoszcz on the yield of some crops. Material for the study consists of rainfall measurements, carried out in a stand- ard way in the years 1981-2010 at the Research Station of the University of Technology and Life Sciences in Bydgoszcz. Station is located in the village of Mochle, located approximately 20 km from the city centre (φ=53013’ N, λ=17051’E, h=98.5 m above sea level) in sparsely urbanized and industrialized area. We also used data of the yield of selected crops (potato, barley, corn for grain, legumes), from the production in the region of Kujawy and Pomorze as well as from our own experimental field. It has been shown that the average long-term rainfall during the growing season allows for classifying Bydgoszcz region as the area with the lowest rainfall in Poland. Analyzed rainfalls were characterized by a very high variability in time, resulting in climatic risk of plant growing. The largest temporal variability related to August. However, there was no extension of the time variability of rainfall totals in the period 1996-2010, as compared to the period 1981-1995. The sole significant growth trend during the period 1981-2010 was found in May. It appeared a tendency to a decline in summer rainfall totals (VI-VIII) in the annual rainfall total, which is consistent with the IPCC projections. Rainfall totals had highly signi cant impact on yields of selected crops. The highest correlation coefficients were found in relations crop-rainfall in the months of increased water needs of plants. Better correlations rainfall-crop were found using data from the production scale as compared with the scale of experimental field.
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Eitzinger, J., Thaler, S., Schmid, E., Strauss, F., Ferrise, R., Moriondo, M., et al. (2013). Sensitivities of crop models to extreme weather conditions during flowering period demonstrated for maize and winter wheat in Austria. J. Agric. Sci., 151(6), 813–835.
Abstract: The objective of the present study was to compare the performance of seven different, widely applied crop models in predicting heat and drought stress effects. The study was part of a recent suite of model inter-comparisons initiated at European level and constitutes a component that has been lacking in the analysis of sources of uncertainties in crop models used to study the impacts of climate change. There was a specific focus on the sensitivity of models for winter wheat and maize to extreme weather conditions (heat and drought) during the short but critical period of 2 weeks after the start of flowering. Two locations in Austria, representing different agro-climatic zones and soil conditions, were included in the simulations over 2 years, 2003 and 2004, exhibiting contrasting weather conditions. In addition, soil management was modified at both sites by following either ploughing or minimum tillage. Since no comprehensive field experimental data sets were available, a relative comparison of simulated grain yields and soil moisture contents under defined weather scenarios with modified temperatures and precipitation was performed for a 2-week period after flowering. The results may help to reduce the uncertainty of simulated crop yields to extreme weather conditions through better understanding of the models’ behaviour. Although the crop models considered (DSSAT, EPIC, WOFOST, AQUACROP, FASSET, HERMES and CROPSYST) mostly showed similar trends in simulated grain yields for the different weather scenarios, it was obvious that heat and drought stress caused by changes in temperature and/or precipitation for a short period of 2 weeks resulted in different grain yields simulated by different models. The present study also revealed that the models responded differently to changes in soil tillage practices, which affected soil water storage capacity.
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Quain, M. D., Makgopa, M. E., Marquez-Garcia, B., Comadira, G., Fernandez-Garcia, N., Olmos, E., et al. (2014). Ectopic phytocystatin expression leads to enhanced drought stress tolerance in soybean (Glycine max) and Arabidopsis thaliana through effects on strigolactone pathways and can also result in improved seed traits. Plant Biotechnol. J., 12(7), 903–913.
Abstract: Ectopic cystatin expression has long been used in plant pest management, but the cysteine protease, targets of these inhibitors, might also have important functions in the control of plant lifespan and stress tolerance that remain poorly characterized. We therefore characterized the effects of expression of the rice cystatin, oryzacystatin-I (OCI), on the growth, development and stress tolerance of crop (soybean) and model (Arabidopsis thaliana) plants. Ectopic OCI expression in soybean enhanced shoot branching and leaf chlorophyll accumulation at later stages of vegetative development and enhanced seed protein contents and decreased the abundance of mRNAs encoding strigolactone synthesis enzymes. The OCI-expressing A. thaliana showed a slow-growth phenotype, with increased leaf numbers and enhanced shoot branching at flowering. The OCI-dependent inhibition of cysteine proteases enhanced drought tolerance in soybean and A. thaliana, photosynthetic CO2 assimilation being much less sensitive to drought-induced inhibition in the OCI-expressing soybean lines. Ectopic OCI expression or treatment with the cysteine protease inhibitor E64 increased lateral root densities in A. thaliana. E64 treatment also increased lateral root densities in the max2-1 mutants that are defective in strigolactone signalling, but not in the max3-9 mutants that are defective in strigolactone synthesis. Taken together, these data provide evidence that OCI-inhibited cysteine proteases participate in the control of growth and stress tolerance through effects on strigolactones. We conclude that cysteine proteases are important targets for manipulation of plant growth, development and stress tolerance, and also seed quality traits.
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