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Van Oijen, M., & Höglind, M. (2016). Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design. Euphytica, 207(3), 627–643.
Abstract: Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway.
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Schmitz, C., Kreidenweis, U., Lotze-Campen, H., Popp, A., Krause, M., Dietrich, J. P., et al. (2014). Agricultural trade and tropical deforestation: interactions and related policy options. Reg Environ Change, 15(8), 1757–1772.
Abstract: The extensive clearing of tropical forests throughout past decades has been partly assigned to increased trade in agricultural goods. Since further trade liberalisation can be expected, remaining rainforests are likely to face additional threats with negative implications for climate mitigation and the local environment. We apply a spatially explicit economic land-use model coupled to a biophysical vegetation model to examine linkages and associated policies between trade and tropical deforestation in the future. Results indicate that further trade liberalisation leads to an expansion of deforestation in Amazonia due to comparative advantages of agriculture in South America. Globally, between 30 and 60 million ha (5-10 %) of tropical rainforests would be cleared additionally, leading to 20-40 Gt additional emissions by 2050. By applying different forest protection policies, those values could be reduced substantially. Most effective would be the inclusion of avoided deforestation into a global emissions trading scheme. Carbon prices corresponding to the concentration target of 550 ppm would prevent deforestation after 2020. Investing in agricultural productivity reduces pressure on tropical forests without the necessity of direct protection. In general, additional trade-induced demand from developed and emerging countries should be compensated by international efforts to protect natural resources in tropical regions.
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Dietrich, J. P., Schmitz, C., Lotze-Campen, H., Popp, A., & Muller, C. (2014). Forecasting technological change in agriculture-An endogenous implementation in a global, and use model. Technological Forecasting and Social Change, 81, 236–249.
Abstract: Technological change in agriculture plays a decisive role for meeting future demands for agricultural goods. However, up to now, agricultural sector models and models on land use change have used technological change as an exogenous input due to various information and data deficiencies. This paper provides a first attempt towards an endogenous implementation based on a measure of agricultural land use intensity. We relate this measure to empirical data on investments in technological change. Our estimated yield elasticity with respect to research investments is 029 and production costs per area increase linearly with an increasing yield level. Implemented in the global land use model MAgPIE (”Model of Agricultural Production and its Impact on the Environment”) this approach provides estimates of future yield growth. Highest future yield increases are required in Sub-Saharan Africa, the Middle East and South Asia. Our validation with FAO data for the period 1995-2005 indicates that the model behavior is in line with observations. By comparing two scenarios on forest conservation we show that protecting sensitive forest areas in the future is possible but requires substantial investments into technological change. (C) 2013 Elsevier Inc. All rights reserved.
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Walkiewicz, A., Bulak, P., Brzezinska, M., Wnuk, E., & Bieganowski, A. (2016). Methane oxidation in heavy metal contaminated Mollic Gleysol under oxic and hypoxic conditions. Environ. Pollut., 213, 403–411.
Abstract: Soils are the largest terrestrial sink for methane (CH4). However, heavy metals may exert toxicity to soil microorganisms, including methanotrophic bacteria. We tested the effect of lead (Pb), zinc (Zn) and nickel (Ni) on CH4 oxidation (1% v/v) and dehydrogenase activity, an index of the activity of the total soil microbial community in Mollic Gleysol soil in oxic and hypoxic conditions (oxia and hypoxia, 20% and 10% v/v O2, respectively). Metals were added in doses corresponding to the amounts permitted of Pb, Zn, Ni in agricultural soils (60, 120, 35 mg kg(-1), respectively), and half and double of these doses. Relatively low metal contents and O2 status reflect the conditions of most agricultural soils of temperate regions. Methane consumption showed high tolerance to heavy metals. The effect of O2 status was stronger than that of metals. CH4 consumption was enhanced under hypoxia, where both the start and the completion of the control and contaminated treatment were faster than under oxic conditions. Dehydrogenase activity, showed higher sensitivity to the contamination (except for low Ni dose), with a stronger effect of heavy metals, than that of the O2 status.
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Bennetzen, E. H., Smith, P., & Porter, J. R. (2016). Agricultural production and greenhouse gas emissions from world regions—The major trends over 40 years. Glob. Environ. Change, 37, 43–55.
Abstract: Since 1970, global agricultural production has more than doubled with agriculture and land-use change now responsible for similar to 1/4 of greenhouse gas emissions from human activities. Yet, while greenhouse gas (GHG) emissions per unit of agricultural product have been reduced at a global level, trends in world regions have been quantified less thoroughly. The KPI (Kaya-Porter Identity) is a novel framework for analysing trends in agricultural production and land-use change and related GHG emissions. We apply this to assess trends and differences in nine world regions over the period 1970-2007. We use a deconstructed analysis of emissions from the mix of multiple sources, and show how each is changing in terms of absolute emissions on a per area and per produced unit basis, and how the change of emissions from each source contributes to the change in total emissions over time. The doubling of global agricultural production has mainly been delivered by developing and transitional countries, and this has been mirrored by increased GHG emissions. The decoupling of emissions from production shows vast regional differences. Our estimates show that emissions per unit crop (as kg CO2-equivalents per Giga Joule crop product), in Oceania, have been reduced by 94% from 1093 to 69; in Central & South America by 57% from 849 to 362; in sub-Saharan Africa by 27% from 421 to 309, and in Europe by 56% from 86 to 38. Emissions per unit livestock (as kg CO2-eq. GJ(-1) livestock product) have reduced; in sub-Saharan Africa by 24% from 6001 to 4580; in Central & South America by 61% from 3742 to 1448; in Central & Eastern Asia by 82% from 3,205 to 591, and; in North America by 28% from 878 to 632. In general, intensive and industrialised systems show the lowest emissions per unit of agricultural production. (C) 2016 Elsevier Ltd. All rights reserved.
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