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Ben Touhami, H., & Bellocchi, G. (2015). Bayesian calibration of the Pasture Simulation model (PaSim) to simulate European grasslands under water stress. Ecological Informatics, 30, 356–364.
Abstract: As modeling becomes a more widespread practice in the agro-environmental sciences, scientists need reliable tools to calibrate models against ever more complex and detailed data. We present a generic Bayesian computation framework for grassland simulation, which enables parameter estimation in the Bayesian formalism by using Monte Carlo approaches. We outline the underlying rationale, discuss the computational issues, and provide results from an application of the Pasture Simulation model (PaSim) to three European grasslands. The framework was suited to investigate the challenging problem of calibrating complex biophysical models to data from altered scenarios generated by precipitation reduction (water stress conditions). It was used to infer the parameters of manipulated grassland systems and to assess the gain in uncertainty reduction by updating parameter distributions using measurements of the output variables.
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Angulo, C., Rötter, R., Lock, R., Enders, A., Fronzek, S., & Ewert, F. (2013). Implication of crop model calibration strategies for assessing regional impacts of climate change in Europe. Agricultural and Forest Meteorology, 170, 32–46.
Abstract: Process-based crop simulation models are increasingly used in regional climate change impact studies, but little is known about the implications of different calibration strategies on simulated yields. This study aims to assess the importance of region-specific calibration of five important field crops (winter wheat, winter barley, potato, sugar beet and maize) across 25 member countries of the European Union (EU25). We examine three calibration strategies and their implications on spatial and temporal yield variability in response to climate change: (i) calculation of phenology parameters only, (ii) consideration of both phenology calibration and a yield correction factor and (iii) calibration of phenology and selected growth processes. The analysis is conducted for 533 climate zones, considering 24 years of observed yield data (1983-2006). The best performing strategy is used to estimate the impacts of climate change, increasing CO2 concentration and technology development on yields for the five crops across EU25, using seven climate change scenarios for the period 2041-2064. Simulations and calibrations are performed with the crop model LINTUL2 combined with a calibration routine implemented in the modelling interface LINTUL-FAST. The results show that yield simulations improve if growth parameters are considered in the calibration for individual regions (strategy 3); e.g. RMSE values for simulated winter wheat yield are 2.36, 1.10 and 0.70 Mg ha(-1) for calibration strategies 1, 2 and 3, respectively. The calibration strategy did not only affect the model simulations under reference climate but also the extent of the simulated climate change impacts. Applying the calibrated model for impact assessment revealed that climatic change alone will reduce crop yields. Consideration of the effects of increasing CO2 concentration and technology development resulted in yield increases for all crops except maize (i.e. the negative effects of climate change were outbalanced by the positive effects of CO2 and technology change), with considerable differences between scenarios and regions. Our simulations also suggest some increase in yield variability due to climate change which, however, is less pronounced than the differences among scenarios which are particularly large when the effects of CO2 concentration and technology development are considered. Our results stress the need for region-specific calibration of crop models used for Europe-wide assessments. Limitations of the considered strategies are discussed. We recommend that future work should focus on obtaining more comprehensive, high quality data with a finer resolution allowing application of improved strategies for model calibration that better account for spatial differences and changes over time in the growth and development parameters used in crop models. (c) 2012 Elsevier B.V. All rights reserved.
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Angulo, C., Gaiser, T., Rötter, R. P., Børgesen, C. D., Hlavinka, P., Trnka, M., et al. (2014). ‘Fingerprints’ of four crop models as affected by soil input data aggregation. European Journal of Agronomy, 61, 35–48.
Abstract: • Systematic analysis of the influence of spatial soil data resolution on simulated regional yields and total growing season evapotranspiration. • The responses of four crop models of different complexity are compared. • Differences between models are larger than the effect of the chosen spatial soil data resolution. • Low influence of soil data resolution due to: high precipitation amount, methods for calculating water retention and method of data aggregation. The spatial variability of soil properties is an important driver of yield variability at both field and regional scale. Thus, when using crop growth simulation models, the choice of spatial resolution of soil input data might be key in order to accurately reproduce observed yield variability. In this study we used four crop models (SIMPLACE<LINTUL-SLIM>, DSSAT-CSM, EPIC and DAISY) differing in the detail of modeling above-ground biomass and yield as well as of modeling soil water dynamics, water uptake and drought effects on plants to simulate winter wheat in two (agro-climatologically and geo-morphologically) contrasting regions of the federal state of North-Rhine-Westphalia (Germany) for the period from 1995 to 2008. Three spatial resolutions of soil input data were taken into consideration, corresponding to the following map scales: 1:50 000, 1:300 000 and 1:1 000 000. The four crop models were run for water-limited production conditions and model results were evaluated in the form of frequency distributions, depicted by bean-plots. In both regions, soil data aggregation had very small influence on the shape and range of frequency distributions of simulated yield and simulated total growing season evapotranspiration for all models. Further analysis revealed that the small influence of spatial resolution of soil input data might be related to: (a) the high precipitation amount in the region which partly masked differences in soil characteristics for water holding capacity, (b) the loss of variability in hydraulic soil properties due to the methods applied to calculate water retention properties of the used soil profiles, and (c) the method of soil data aggregation. No characteristic “fingerprint” between sites, years and resolutions could be found for any of the models. Our results support earlier recommendation to evaluate model results on the basis of frequency distributions since these offer quick and better insight into the distribution of simulation results as compared to summary statistics only. Finally, our results support conclusions from other studies about the usefulness of considering a multi-model approach to quantify the uncertainty in simulated yields introduced by the crop growth simulation approach when exploring the effects of scaling for regional yield impact assessments.
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