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Crout, N. M. J., Craigon, J., Cox, G. M., Jao, Y., Tarsitano, D., Wood, A. T. A., et al. (2014). An objective approach to model reduction: Application to the Sirius wheat model. Agricultural and Forest Meteorology, 189-190(100), 211–219.
Abstract: An existing simulation model of wheat growth and development, Sirius, was evaluated through a systematic model reduction procedure. The model was automatically manipulated under software control to replace variables within the model structure with constants, individually and in combination. Predictions of the resultant models were compared to growth analysis observations of total biomass, grain yield, and canopy leaf area derived from 9 trials conducted in the UK and New Zealand under optimal, nitrogen limiting and drought conditions. Model performance in predicting these observations was compared in order to evaluate whether individual model variables contributed positively to the overall prediction. Of the 1 1 1 model variables considered 16 were identified as potentially redundant. Areas of the model where there was evidence of redundancy were: (a) translocation of biomass carbon to grain; (b) nitrogen physiology; (c) adjustment of air temperature for various modelled processes; (d) allowance for diurnal variation in temperature; (e) vernalisation (f) soil nitrogen mineralisation (g) soil surface evaporation. It is not suggested that these are not important processes in real crops, rather, that their representation in the model cannot be justified in the context of the analysis. The approach described is analogous to a detailed model inter-comparison although it would be better described as a model intra-comparison as it is based on the comparison of many simplified forms of the same model. The approach provides automation to increase the efficiency of the evaluation and a systematic means of increasing the rigour of the evaluation.
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Gabaldón-Leal, C., Webber, H., Otegui, M. E., Slafer, G. A., Ordonez, R. A., Gaiser, T., et al. (2016). Modelling the impact of heat stress on maize yield formation. Field Crops Research, 198, 226–237.
Abstract: The frequency and intensity of extreme high temperature events are expected to increase with climate change. Higher temperatures near anthesis have a large negative effect on maize (Zea mays, L.) grain yield. While crop growth models are commonly used to assess climate change impacts on maize and other crops, it is only recently that they have accounted for such heat stress effects, despite limited field data availability for model evaluation. There is also increasing awareness but limited testing of the importance of canopy temperature as compared to air temperature for heat stress impact simulations. In this study, four independent irrigated field trials with controlled heating imposed using polyethylene shelters were used to develop and evaluate a heat stress response function in the crop modeling framework SIMPLACE, in which the Lintul5 crop model was combined with a canopy temperature model. A dataset from Argentina with the temperate hybrid Nidera AX 842 MG (RM 119) was used to develop a yield reduction function based on accumulated hourly stress thermal time above a critical temperature of 34 degrees C. A second dataset from Spain with a FAO 700 cultivar was used to evaluate the model with daily weather inputs in two sets of simulations. The first was used to calibrate SIMPLACE for conditions with no heat stress, and the second was used to evaluate SIMPLACE under conditions of heat stress using the reduction factor obtained with the Argentine dataset. Both sets of simulations were conducted twice; with the heat stress function alternatively driven with air and simulated canopy temperature. Grain yield simulated under heat stress conditions improved when canopy temperature was used instead of air temperature (RMSE equal to 175 and 309 g m(-2), respectively). For the irrigated and high radiative conditions, raising the critical threshold temperature for heat stress to 39 degrees C improved yield simulation using air temperature (RMSE: 221 gm(-2)) without the need to simulate canopy temperature (RMSE: 175 gm(-2)). However, this approach of adjusting thresholds is only likely to work in environments where climatic variables and the level of soil water deficit are constant, such as irrigated conditions and are not appropriate for rainfed production conditions. (C) 2016 Elsevier B.V. All rights reserved.
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Wallach, D., Mearns, L. O., Ruane, A. C., Rötter, R. P., & Asseng, S. (2016). Lessons from climate modeling on the design and use of ensembles for crop modeling. Clim. Change, 139(3-4), 551–564.
Abstract: Working with ensembles of crop models is a recent but important development in crop modeling which promises to lead to better uncertainty estimates for model projections and predictions, better predictions using the ensemble mean or median, and closer collaboration within the modeling community. There are numerous open questions about the best way to create and analyze such ensembles. Much can be learned from the field of climate modeling, given its much longer experience with ensembles. We draw on that experience to identify questions and make propositions that should help make ensemble modeling with crop models more rigorous and informative. The propositions include defining criteria for acceptance of models in a crop MME, exploring criteria for evaluating the degree of relatedness of models in a MME, studying the effect of number of models in the ensemble, development of a statistical model of model sampling, creation of a repository for MME results, studies of possible differential weighting of models in an ensemble, creation of single model ensembles based on sampling from the uncertainty distribution of parameter values or inputs specifically oriented toward uncertainty estimation, the creation of super ensembles that sample more than one source of uncertainty, the analysis of super ensemble results to obtain information on total uncertainty and the separate contributions of different sources of uncertainty and finally further investigation of the use of the multi-model mean or median as a predictor.
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Schauberger, B., Rolinski, S., & Müller, C. (2016). A network-based approach for semi-quantitative knowledge mining and its application to yield variability. Environ. Res. Lett., 11(12), 123001.
Abstract: Variability of crop yields is detrimental for food security. Under climate change its amplitude is likely to increase, thus it is essential to understand the underlying causes and mechanisms. Crop models are the primary tool to project future changes in crop yields under climate change. Asystematic overview of drivers and mechanisms of crop yield variability (YV) can thus inform crop model development and facilitate improved understanding of climate change impacts on crop yields. Yet there is a vast body of literature on crop physiology and YV, which makes a prioritization of mechanisms for implementation in models challenging. Therefore this paper takes on a novel approach to systematically mine and organize existing knowledge from the literature. The aim is to identify important mechanisms lacking in models, which can help to set priorities in model improvement. We structure knowledge from the literature in a semi-quantitative network. This network consists of complex interactions between growing conditions, plant physiology and crop yield. We utilize the resulting network structure to assign relative importance to causes of YV and related plant physiological processes. As expected, our findings confirm existing knowledge, in particular on the dominant role of temperature and precipitation, but also highlight other important drivers of YV. More importantly, our method allows for identifying the relevant physiological processes that transmit variability in growing conditions to variability in yield. We can identify explicit targets for the improvement of crop models. The network can additionally guide model development by outlining complex interactions between processes and by easily retrieving quantitative information for each of the 350 interactions. We show the validity of our network method as a structured, consistent and scalable dictionary of literature. The method can easily be applied to many other research fields.
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Yin, X. G., Kersebaum, K. C., Kollas, C., Manevski, K., Baby, S., Beaudoin, N., et al. (2017). Performance of process-based models for simulation of grain N in crop rotations across Europe. Agric. Syst., 154, 63–77.
Abstract: The accurate estimation of crop grain nitrogen (N; N in grain yield) is crucial for optimizing agricultural N management, especially in crop rotations. In the present study, 12 process-based models were applied to simulate the grain N of i) seven crops in rotations, ii) across various pedo-climatic and agro-management conditions in Europe, under both continuous simulation and single year simulation, and for iv) two calibration levels, namely minimal and detailed calibration. Generally, the results showed that the accuracy of the simulations in predicting grain N increased under detailed calibration. The models performed better in predicting the grain N of winter wheat (Triticum aestivum L.), winter barley (Hordewn vulgare L.) and spring barley (Hordeum vulgare L.) compared to spring oat (Avena saliva L.), winter rye (Secale cereale L.), pea (Piswn sativum L.) and winter oilseed rape (Brassica napus L.). These differences are linked to the intensity of parameterization with better parameterized crops showing lower prediction errors. The model performance was influenced by N fertilization and irrigation treatments, and a majority of the predictions were more accurate under low N and rainfed treatments. Moreover, the multi-model mean provided better predictions of grain N compared to any individual model. In regard to the Individual models, DAISY, FASSET, HERMES, MONICA and STICS are suitable for predicting grain N of the main crops in typical European crop rotations, which all performed well in both continuous simulation and single year simulation. Our results show that both the model initialization and the cover crop effects in crop rotations should be considered in order to achieve good performance of continuous simulation. Furthermore, the choice of either continuous simulation or single year simulation should be guided by the simulation objectives (e.g. grain yield, grain N content or N dynamics), the crop sequence (inclusion of legumes) and treatments (rate and type of N fertilizer) included in crop rotations and the model formalism.
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