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Author |
Wallach, D.; Nissanka, S.P.; Karunaratne, A.S.; Weerakoon, W.M.W.; Thorburn, P.J.; Boote, K.J.; Jones, J.W. |
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Title |
Accounting for both parameter and model structure uncertainty in crop model predictions of phenology: A case study on rice |
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Journal Article |
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Year |
2016 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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Keywords |
Uncertainty; Phenology; Parameter uncertainty; Multi-model ensemble; Generalized least squares; Rice; Crop model; APSIM; DSSAT |
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Abstract |
We consider predictions of the impact of climate warming on rice development times in Sri Lanka. The major emphasis is on the uncertainty of the predictions, and in particular on the estimation of mean squared error of prediction. Three contributions to mean squared error are considered. The first is parameter uncertainty that results from model calibration. To take proper account of the complex data structure, generalized least squares is used to estimate the parameters and the variance-covariance matrix of the parameter estimators. The second contribution is model structure uncertainty, which we estimate using two different models. An ANOVA analysis is used to separate the contributions of parameter and model uncertainty to mean squared error. The third contribution is model error, which is estimated using hindcasts. Mean squared error of prediction of time from emergence to maturity, for baseline +2 °C, is estimated as 108 days2, with model error contributing 86 days2, followed by model structure uncertainty which contributes 15 days2 and parameter uncertainty which contributes 7 days2. We also show how prediction uncertainty is reduced if prediction concerns development time averaged over years, or the difference in development time between baseline and warmer temperatures. |
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2016-09-13 |
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1161-0301 |
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Article |
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CropM |
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CropM; wos; ftnotmacsur; wsnotyet; |
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MA @ admin @ |
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4777 |
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Maiorano, A.; Martre, P.; Asseng, S.; Ewert, F.; Müller, C.; Rötter, R.P.; Ruane, A.C.; Semenov, M.A.; Wallach, D.; Wang, E.; Alderman, P.D.; Kassie, B.T.; Biernath, C.; Basso, B.; Cammarano, D.; Challinor, A.J.; Doltra, J.; Dumont, B.; Rezaei, E.E.; Gayler, S.; Kersebaum, K.C.; Kimball, B.A.; Koehler, A.-K.; Liu, B.; O’Leary, G.J.; Olesen, J.E.; Ottman, M.J.; Priesack, E.; Reynolds, M.; Stratonovitch, P.; Streck, T.; Thorburn, P.J.; Waha, K.; Wall, G.W.; White, J.W.; Zhao, Z.; Zhu, Y. |
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Title |
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles |
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Journal Article |
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Year |
2016 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
202 |
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5-20 |
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Keywords |
Impact uncertainty; High temperature; Model improvement; Multi-model ensemble; Wheat crop model |
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Abstract |
To improve climate change impact estimates and to quantify their uncertainty, multi-model ensembles (MMEs) have been suggested. Model improvements can improve the accuracy of simulations and reduce the uncertainty of climate change impact assessments. Furthermore, they can reduce the number of models needed in a MME. Herein, 15 wheat growth models of a larger MME were improved through re-parameterization and/or incorporating or modifying heat stress effects on phenology, leaf growth and senescence, biomass growth, and grain number and size using detailed field experimental data from the USDA Hot Serial Cereal experiment (calibration data set). Simulation results from before and after model improvement were then evaluated with independent field experiments from a CIMMYT world-wide field trial network (evaluation data set). Model improvements decreased the variation (10th to 90th model ensemble percentile range) of grain yields simulated by the MME on average by 39% in the calibration data set and by 26% in the independent evaluation data set for crops grown in mean seasonal temperatures >24 °C. MME mean squared error in simulating grain yield decreased by 37%. A reduction in MME uncertainty range by 27% increased MME prediction skills by 47%. Results suggest that the mean level of variation observed in field experiments and used as a benchmark can be reached with half the number of models in the MME. Improving crop models is therefore important to increase the certainty of model-based impact assessments and allow more practical, i.e. smaller MMEs to be used effectively. |
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2016-09-13 |
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Newsletter July 2016 |
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0378-4290 |
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CropM |
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CropMwp;wos; ft=macsur; wsnot_yet; |
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MA @ admin @ |
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4776 |
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Höglind, M.; Van Oijen, M.; Cameron, D.; Persson, T. |
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Process-based simulation of growth and overwintering of grassland using the BASGRA model |
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Journal Article |
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2016 |
Publication |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
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335 |
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1-15 |
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Cold hardening; Frost injury; Phleum pratense L.; Process-based; modelling; Winter survival; Yield; low-temperature tolerance; perennial forage crops; dry-matter; production; climate-change; nutritive-value; snow-cover; bayesian; calibration; timothy regrowth; phleum-pratense; lolium-perenne |
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Process-based models (PBM) for simulation of weather dependent grass growth can assist farmers and plant breeders in addressing the challenges of climate change by simulating alternative roads of adaptation. They can also provide management decision support under current conditions. A drawback of existing grass models is that they do not take into account the effect of winter stresses, limiting their use for full-year simulations in areas where winter survival is a key factor for yield security. Here, we present a novel full-year PBM for grassland named BASGRA. It was developed by combining the LINGRA grassland model (Van Oijen et al., 2005a) with models for cold hardening and soil physical winter processes. We present the model and show how it was parameterized for timothy (Phleum pratense L.), the most important forage grass in Scandinavia and parts of North America and Asia. Uniquely, BASGRA simulates the processes taking place in the sward during the transition from summer to winter, including growth cessation and gradual cold hardening, and functions for simulating plant injury due to low temperatures, snow and ice affecting regrowth in spring. For the calibration, we used detailed data from five different locations in Norway, covering a wide range of agroclimatic regions, day lengths (latitudes from 59 degrees to 70 degrees N) and soil conditions. The total dataset included 11 variables, notably above-ground dry matter, leaf area index, tiller density, content of C reserves, and frost tolerance. All data were used in the calibration. When BASGRA was run with the maximum a-posteriori (MAP) parameter vector from the single, Bayesian calibration, nearly all measured variables were simulated to an overall normalized root mean squared error (NRMSE) <0.5. For many site x experiment combinations, NRMSE was <0.3. The temporal dynamics were captured well for most variables, as evaluated by comparing simulated time courses versus data for the individual sites. The results may suggest that BASGRA is a reasonably robust model, allowing for simulation of growth and several important underlying processes with acceptable accuracy for a range of agroclimatic conditions. However, the robustness of the model needs to be tested further using independent data from a wide range of growing conditions. Finally we show an example of application of the model, comparing overwintering risks in two climatically different sites, and discuss future model applications. Further development work should include improved simulation of the dynamics of C reserves, and validation of winter tiller dynamics against independent data. (C) 2016 Elsevier B.V. All rights reserved. |
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2016-07-28 |
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English |
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0304-3800 |
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CropM, LiveM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4764 |
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Author |
Seddaiu, G.; Iocola, I.; Farina, R.; Orsini, R.; Iezzi, G.; Roggero, P.P. |
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Long term effects of tillage practices and N fertilization in rainfed Mediterranean cropping systems: durum wheat, sunflower and maize grain yield |
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Journal Article |
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Year |
2016 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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77 |
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166-178 |
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Keywords |
No tillage; Minimum tillage; Silty-clay soil; Yield stability; Recursive partitioning analysis; Rainfed cropping systems; northern Great-Plains; clay loam soil; nitrogen-fertilization; conventional tillage; winter-wheat; growth; quality; rotation; crops; water |
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Long term investigations on the combined effects of tillage systems and other agronomic practices such as mineral N fertilization under Mediterranean conditions on durum wheat are very scanty and findings are often contradictory. Moreover, no studies are available on the long term effect of the adoption of conservation tillage on grain yield of maize and sunflower grown in rotation with durum wheat under rainfed Mediterranean conditions. This paper reports the results of a 20-years experiment on a durum wheat-sunflower (7 years) and durum wheat–maize (13 years) two-year rotation, whose main objective was to quantify the long term effects of different tillage practices (CT = conventional tillage; MT = minimum tillage; NT = no tillage) combined with different nitrogen fertilizer rates (N0, N1, N2 corresponding to 0, 45 and 90 kg N ha−1 for sunflower, and 0, 90 and 180 kg N ha−1 for wheat and maize) on grain yield, yield components and yield stability for the three crops. In addition, the influence of meteorological factors on the interannual variability of studied variables was also assessed. For durum wheat, NT did not allow substantial yield benefits leading to comparable yields with respect to CT in ten out of twenty years. For both sunflower and maize, NT under rainfed conditions was not a viable options, because of the unsuitable (i.e., too wet) soil conditions of the clayish soil at sowing. Both spring crops performed well with MT. No significant N × tillage interaction was found for the three crops. As expected, the response of durum wheat and maize grain yield to N was remarkable, while sunflower grain yield was not significantly influenced by N rate. Wheat yield was constrained by high temperatures in January during tillering and drought in April during heading. The interannual yield variability of sunflower was mainly associated to soil water deficit at flowering and air temperature during seed filling. Heavy rains during this latter phase strongly constrained sunflower grain yield. Maize grain yield was negatively affected by high temperatures in June and drought in July, this latter factor was particularly important in the fertilized maize. Considering both yield and yield stability, durum wheat and sunflower performed better under MT and N1 while maize performed better under both CT and MT and with N2 rates. The results of this long term study are suitable for supporting policies on sustainable Mediterranean rainfed cropping systems and also for cropping system modelling. |
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2016-07-22 |
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1161-0301 |
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CropM, ft_macsur |
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MA @ admin @ |
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4722 |
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Author |
Tao, F.; Zhang, Z.; Zhang, S.; Rötter, R.P. |
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Variability in crop yields associated with climate anomalies in China over the past three decades |
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Journal Article |
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2016 |
Publication |
Regional Environmental Change |
Abbreviated Journal |
Reg Environ Change |
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16 |
Issue |
6 |
Pages |
1715-1723 |
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Keywords |
Adaptation; Climate change; Climate extremes; Drought; Impacts and vulnerability |
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We used simple and explicit methods, as well as improved datasets for climate, crop phenology and yields, to address the association between variability in crop yields and climate anomalies in China from 1980 to 2008. We identified the most favourable and unfavourable climate conditions and the optimum temperatures for crop productivity in different regions of China. We found that the simultaneous occurrence of high temperatures, low precipitation and high solar radiation was unfavourable for wheat, maize and soybean productivity in large portions of northern, northwestern and northeastern China; this was because of droughts induced by warming or an increase in solar radiation. These climate anomalies could cause yield losses of up to 50 % for wheat, maize and soybeans in the arid and semi-arid regions of China. High precipitation and low solar radiation were unfavourable for crop productivity throughout southeastern China and could cause yield losses of approximately 20 % for rice and 50 % for wheat and maize. High temperatures were unfavourable for rice productivity in southwestern China because they induced heat stress, which could cause rice yield losses of approximately 20 %. In contrast, high temperatures and low precipitation were favourable for rice productivity in northeastern and eastern China. We found that the optimum temperatures for high yields were crop specific and had an explicit spatial pattern. These findings improve our understanding of the impacts of extreme climate events on agricultural production in different regions of China. |
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2016-06-20 |
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English |
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1436-3798 1436-378x |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
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4757 |
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