Abstract: LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.

Abstract: Process-based crop simulation models are increasingly used in regional climate change impact studies, but little is known about the implications of different calibration strategies on simulated yields. This study aims to assess the importance of region-specific calibration of five important field crops (winter wheat, winter barley, potato, sugar beet and maize) across 25 member countries of the European Union (EU25). We examine three calibration strategies and their implications on spatial and temporal yield variability in response to climate change: (i) calculation of phenology parameters only, (ii) consideration of both phenology calibration and a yield correction factor and (iii) calibration of phenology and selected growth processes. The analysis is conducted for 533 climate zones, considering 24 years of observed yield data (1983-2006). The best performing strategy is used to estimate the impacts of climate change, increasing CO2 concentration and technology development on yields for the five crops across EU25, using seven climate change scenarios for the period 2041-2064. Simulations and calibrations are performed with the crop model LINTUL2 combined with a calibration routine implemented in the modelling interface LINTUL-FAST. The results show that yield simulations improve if growth parameters are considered in the calibration for individual regions (strategy 3); e.g. RMSE values for simulated winter wheat yield are 2.36, 1.10 and 0.70 Mg ha(-1) for calibration strategies 1, 2 and 3, respectively. The calibration strategy did not only affect the model simulations under reference climate but also the extent of the simulated climate change impacts. Applying the calibrated model for impact assessment revealed that climatic change alone will reduce crop yields. Consideration of the effects of increasing CO2 concentration and technology development resulted in yield increases for all crops except maize (i.e. the negative effects of climate change were outbalanced by the positive effects of CO2 and technology change), with considerable differences between scenarios and regions. Our simulations also suggest some increase in yield variability due to climate change which, however, is less pronounced than the differences among scenarios which are particularly large when the effects of CO2 concentration and technology development are considered. Our results stress the need for region-specific calibration of crop models used for Europe-wide assessments. Limitations of the considered strategies are discussed. We recommend that future work should focus on obtaining more comprehensive, high quality data with a finer resolution allowing application of improved strategies for model calibration that better account for spatial differences and changes over time in the growth and development parameters used in crop models. (c) 2012 Elsevier B.V. All rights reserved.

Abstract: Rice models have been widely used in simulating and predicting rice phenology in contrasting climate zones, however the uncertainties from model structure (different equations or models) and/or model parameters were rarely investigated. Here, five rice phenological models/modules (Le., CERES-Rice, ORYZA2000, RCM, Beta Model and SIMRIW) were applied to simulate rice phenology at 23 experimental stations from 1992 to 2009 in two major rice cultivation regions of China: the northeastern China and the southwestern China. To investigate the uncertainties from model biophysical parameters, each model was run with randomly perturbed 50 sets of parameters. The results showed that the median of ensemble simulations were better than the simulation by most models. Models couldn’t simulate well in some specific years despite of parameters optimization, suggesting model structure limit model performance in some cases. The models adopting accumulative thermal time function (e.g., CERES-Rice and ORYZA2000) had better performance in the southwestern China, in contrast, those adopting exponential function (e.g., Beta model and RCM model) had better performance in the northeastern China. In northeastern China, the contribution of model structure and model parameters to model total variance was, respectively, about 55.90% and 44.10% in simulating heading date, and about 75.43% and 24.57% in simulating maturity date. In the southwestern China, the contribution of model structure and model parameters to model total variance was, respectively, about 79.97% and 27.03% in simulating heading date, about 92.15% and 7.85% in simulating maturity date. Uncertainty from model structure was the most relevant source. The results highlight that the temperature response functions of rice development rate under extreme climate conditions should be improved based on environment-controlled experimental data.