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| Author |
Brylinska, M. |
| Title |
Factors underlying changes in population of Phytophthora infestans in Poland |
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| Year |
2015 |
Publication |
FACCE MACSUR Reports |
Abbreviated Journal |
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| Volume |
5 |
Issue |
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Pages |
Sp5-9 |
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Abstract  |
Phytophthora infestans (Mont.) de Bary belongs to Oomycetes and it causes the most destructive potato disease worldwide – late blight. It originates from Mexico but it has spread wherever potatoes are grown. P. infestans populations are diversified, sexual or asexual and their composition may be affected by climate changes. Mating type, mitochondrial haplotype, Simple Sequence Repeats (SSR) markers, sensitivity to metalaxyl and virulence were evaluated to monitor changes in Polish P. infestans population.Samples of potato leaflets with single late blight lesions were collected from fields located in three regions of Poland: Mlochów, Boguchwala and Siedlce, in three years 2010, 2011 and 2012. In the region of Mlochów intensively protected fields are dominating. There are mainly small gardens and experimental fields near Boguchwala. In Siedlce region early and starch potatoes are cultivated. Total number of isolates tested was 365. Mating type, mitochondrial haplotype and SSR were evaluated using a PCR method. Sensitivity to metalaxyl was tested on rye A agar media. Virulence was tested on detached potato leaflets.Polish P. infestans population is diverse. We did not observe major clonal lineages. A1 mating type (69%) and Ia mitochondrial haplotype (72.7%) dominated. Most of the isolates were sensitive to metalaxyl (66%). We noted differences in population composition between the regions which indicate that cultivation system has an impact on the population of P. infestans. No Label |
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MACSUR Science Conference 2015 »Integrated Climate Risk Assessment in Agriculture & Food«, 8–9+10 April 2015, Reading, UK |
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no |
| Call Number |
MA @ admin @ |
Serial |
2124 |
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Boeckx, T.; Winters, A.L.; Webb, K.J.; Kingston-Smith, A.H. |
| Title |
Polyphenol oxidase in leaves: is there any significance to the chloroplastic localization |
Type |
Journal Article |
| Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
| Volume |
66 |
Issue |
12 |
Pages |
3571-3579 |
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Catechol Oxidase/*metabolism; Cell Compartmentation; Chloroplasts/*enzymology; Environment; Photosynthesis; Plant Leaves/*enzymology; Abiotic stress; polyphenol oxidase; secondary metabolism. |
| Abstract |
Polyphenol oxidase (PPO) catalyses the oxidation of monophenols and/or o-diphenols to o-quinones with the concomitant reduction of oxygen to water which results in protein complexing and the formation of brown melanin pigments. The most frequently suggested role for PPO in plants has been in defence against herbivores and pathogens, based on the physical separation of the chloroplast-localized enzyme from the vacuole-localized substrates. The o-quinone-protein complexes, formed as a consequence of cell damage, may reduce the nutritional value of the tissue and thereby reduce predation but can also participate in the formation of structural barriers against invading pathogens. However, since a sufficient level of compartmentation-based regulation could be accomplished if PPO was targeted to the cytosol, the benefit derived by some plant species in having PPO present in the chloroplast lumen remains an intriguing question. So is there more to the chloroplastic location of PPO? An interaction between PPO activity and photosynthesis has been proposed on more than one occasion but, to date, evidence either for or against direct involvement has been equivocal, and the lack of identified chloroplastic substrates remains an issue. Similarly, PPO has been suggested to have both pro- and anti-oxidant functions. Nevertheless, several independent lines of evidence suggest that PPO responds to environmental conditions and could be involved in the response of plants to abiotic stress. This review highlights our current understanding of the in vivo functions of PPO and considers the potential opportunities it presents for exploitation to increase stress tolerance in food crops. |
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0022-0957 1460-2431 |
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Review |
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CropM |
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MA @ admin @ |
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4552 |
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Ma, S.; Lardy, R.; Graux, A.-I.; Ben Touhami, H.; Klumpp, K.; Martin, R.; Bellocchi, G. |
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Regional-scale analysis of carbon and water cycles on managed grassland systems |
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Journal Article |
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2015 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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72 |
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356-371 |
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carbon flux; eddy flux measurements; model evaluation; pasture simulation model (pasim); water balance; pasture simulation-model; nitrous-oxide emissions; primary productivity npp; comparing global-models; net ecosystem exchange; greenhouse-gas balance; climate-change; agricultural systems; co2 exchange; european grasslands |
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Predicting regional and global carbon (C) and water dynamics on grasslands has become of major interest, as grasslands are one of the most widespread vegetation types worldwide, providing a number of ecosystem services (such as forage production and C storage). The present study is a contribution to a regional-scale analysis of the C and water cycles on managed grasslands. The mechanistic biogeochemical model PaSim (Pasture Simulation model) was evaluated at 12 grassland sites in Europe. A new parameterization was obtained on a common set of eco-physiological parameters, which represented an improvement of previous parameterization schemes (essentially obtained via calibration at specific sites). We found that C and water fluxes estimated with the parameter set are in good agreement with observations. The model with the new parameters estimated that European grassland are a sink of C with 213 g C m(-2) yr(-1), which is close to the observed net ecosystem exchange (NEE) flux of the studied sites (185 g C m(-2) yr(-1) on average). The estimated yearly average gross primary productivity (GPP) and ecosystem respiration (RECO) for all of the study sites are 1220 and 1006 g C m(-2) yr(-1), respectively, in agreement with observed average GPP (1230 g C m(-2) yr(-1)) and RECO (1046 g C m(-2) yr(-1)). For both variables aggregated on a weekly basis, the root mean square error (RMSE) was similar to 5-16 g C week(-1) across the study sites, while the goodness of fit (R-2) was similar to 0.4-0.9. For evapotranspiration (ET), the average value of simulated ET (415 mmyr(-1)) for all sites and years is close to the average value of the observed ET (451 mm yr(-1)) by flux towers (on a weekly basis, RMSE similar to 2-8 mm week(-1); R-2 = 0.3-0.9). However, further model development is needed to better represent soil water dynamics under dry conditions and soil temperature in winter. A quantification of the uncertainties introduced by spatially generalized parameter values in C and water exchange estimates is also necessary. In addition, some uncertainties in the input management data call for the need to improve the quality of the observational system. |
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2015-10-09 |
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1364-8152 |
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CropM, LiveM, ft_macsur |
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no |
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MA @ admin @ |
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4695 |
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Ewert, F.; al, E. |
| Title |
Uncertainties in Scaling-Up Crop Models for Large-Area Climate Change Impact Assessments |
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Report |
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2015 |
Publication |
FACCE MACSUR Reports |
Abbreviated Journal |
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6 |
Issue |
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Pages |
D-C3.3 |
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Problems related to food security and sustainable development are complex (Ericksenet al., 2009) and require consideration of biophysical, economic, political, and social factors, as well as their interactions, at the level of farms, regions, nations, and globally. While the solution to such societal problems may be largely political, there is a growing recognition of the need for science to provide sound information to decision-makers (Meinke et al., 2009). Achieving this, particularly in light of largely uncertain future climate and socio-economic changes, will necessitate integrated assessment approaches and appropriate integrated assessment modeling (IAM) tools to perform them. Recent (Ewertet al., 2009; van Ittersumet al., 2008) and ongoing (Rosenzweiget al., 2013) studies have tried to advance the integrated use of biophysical and economic models to represent better the complex interactions in agricultural systems that largely determine food supply and sustainable resource use. Nonetheless, the challenges for model integration across disciplines are substantial and range from methodological and technical details to an often still-weak conceptual basis on which to ground model integration (Ewertet al., 2009; Janssenet al., 2011). New generations of integrated assessment models based on well-understood, general relationships that are applicable to different agricultural systems across the world are still to be developed. Initial efforts are underway towards this advancement (Nelsonet al., 2014; Rosenzweiget al., 2013). Together with economic and climate models, crop models constitute an essential model group in IAM for large-area cropping systems climate change impact assessments. However, in addition to challenges associated with model integration, inadequate representation of many crops and crop management systems, as well as a lack of data for model initialization and calibration, limit the integration of crop models with climate and economic models (Ewertet al., 2014). A particular obstacle is the mismatch between the temporal and spatial scale of input/output variables required and delivered by the various models in the IAM model chain. Crop models are typically developed, tested, and calibrated for field-scale application (Booteet al., 2013; see also Part 1, Chapter 4 in this volume) and short time-series limited to one or few seasons. Although crop models are increasingly used for larger areas and longer time-periods (Bondeauet al., 2007; Deryng et al., 2011; Elliottet al., 2014) rigorous evaluation of such applications is pending. Among the different sources of uncertainty related to climate and soil data, model parameters, and structure, the uncertainty from methods used to scale-up crop models has received little attention, though recent evaluations indicate that upscaling of crop models for climate change impact assessment and the resulting errors and uncertainties deserve attention in order to advance crop modeling for climate change assessment (Ewertet al., 2014; R¨ otteret al., 2011). This reality is now reflected in the scientific agendas of new international research projects and programs such as the Agricultural Model Intercomparison and Improvement Project (AgMIP; Rosenzweiget al., 2013) and MACSUR (MACSUR, 2014). In this chapter, progress in evaluation of scaling methods with their related uncertainties is reviewed. Specific emphasis is on examining the results of systematic studies recently established in AgMIP and MACSUR. Main features of the respective simulation studies are presented together with preliminary results. Insights from these studies are summarized and conclusions for further work are drawn. No Label |
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MA @ admin @ |
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2096 |
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Kersebaum, K.C. |
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Simulating crop rotations and management across climatic zones in Europe – an intercomparison study using fifteen models |
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2015 |
Publication |
FACCE MACSUR Reports |
Abbreviated Journal |
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| Volume |
5 |
Issue |
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Pages |
Sp5-28 |
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Process based crop simulation models are widely used to assess crop production under current or future climate conditions. Most studies on climate impacts on crop growth are so far focussed on single crops and single-year simulations. However, it is known that the position of crops within a rotation can influence crop growth significantly due to carry-over effects between seasons. We compared crop models on crop rotation effects from five sites across Central Europe providing in total data of 301 cropping seasons and treatments. Treatments comprised irrigation, nitrogen (N) fertilisation, atmospheric [CO2], tillage, residue management, cover crops and soils. Crop rotations were simulated with 15 crop models as single-year simulations and/or continuous simulations over whole crop rotations in “restricted calibration” runs. Lower RMSE between observed and simulated crop yields were obtained for continuous runs as compared to single-year runs. Relatively low carry-over effects were observed due to equilibration of soil water over winter and high N fertilisation levels. Consistently, a sub-set of models applied to an additional rainfed Mediterranean site reproduced larger carry-over effects of soil water. Irrigation, N supply, cover crops and atmospheric [CO2] showed clearer effects than tillage and crop residue management. Model performance varied distinctly between crops showing the necessity to provide experimental data for model calibration also for less prominent crops. No Label |
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MACSUR Science Conference 2015 »Integrated Climate Risk Assessment in Agriculture & Food«, 8–9+10 April 2015, Reading, UK |
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no |
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MA @ admin @ |
Serial |
2143 |
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