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Waterworth, W.M.; Bray, C.M.; West, C.E. |
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Title |
The importance of safeguarding genome integrity in germination and seed longevity |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3549-3558 |
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Keywords |
DNA Damage/genetics; DNA Repair/genetics; *Genome, Plant; Germination/*genetics; Plant Physiological Phenomena/*genetics; Seeds/*genetics; Ageing; DNA repair; double-strand break; germination; longevity; recombination; seed vigour; viability |
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Abstract  |
Seeds are important to agriculture and conservation of plant biodiversity. In agriculture, seed germination performance is an important determinant of crop yield, in particular under adverse climatic conditions. Deterioration in seed quality is associated with the accumulation of cellular damage to macromolecules including lipids, protein, and DNA. Mechanisms that mitigate the deleterious cellular damage incurred in the quiescent state and in cycles of desiccation-hydration are crucial for the maintenance of seed viability and germination vigour. In early-imbibing seeds, damage to the embryo genome must be repaired prior to initiation of cell division to minimize growth inhibition and mutation of genetic information. Here we review recent advances that have established molecular links between genome integrity and seed quality. These studies identified that maintenance of genome integrity is particularly important to the seed stage of the plant lifecycle, revealing new insight into the physiological roles of plant DNA repair and recombination mechanisms. The high conservation of DNA repair and recombination factors across plant species underlines their potential as promising targets for the improvement of crop performance and development of molecular markers for prediction of seed vigour. |
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0022-0957 1460-2431 |
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Review |
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CropM |
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MA @ admin @ |
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4579 |
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Author |
Van Oijen, M.; Höglind, M. |
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Title |
Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design |
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Journal Article |
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Year |
2016 |
Publication |
Euphytica |
Abbreviated Journal |
Euphytica |
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Volume |
207 |
Issue |
3 |
Pages |
627-643 |
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Keywords |
BASGRA; cold tolerance; genotype-environment interaction; plant breeding; process-based modelling; yield stability; grassland productivity; timothy regrowth; climate-change; water-deficit; forest models; late blight; leaf-area; calibration; growth; tolerance |
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Abstract |
Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway. |
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2016-10-31 |
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0014-2336 |
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CropM, ft_macsur |
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MA @ admin @ |
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4820 |
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Boeckx, T.; Winters, A.L.; Webb, K.J.; Kingston-Smith, A.H. |
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Title |
Polyphenol oxidase in leaves: is there any significance to the chloroplastic localization |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3571-3579 |
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Keywords |
Catechol Oxidase/*metabolism; Cell Compartmentation; Chloroplasts/*enzymology; Environment; Photosynthesis; Plant Leaves/*enzymology; Abiotic stress; polyphenol oxidase; secondary metabolism. |
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Abstract |
Polyphenol oxidase (PPO) catalyses the oxidation of monophenols and/or o-diphenols to o-quinones with the concomitant reduction of oxygen to water which results in protein complexing and the formation of brown melanin pigments. The most frequently suggested role for PPO in plants has been in defence against herbivores and pathogens, based on the physical separation of the chloroplast-localized enzyme from the vacuole-localized substrates. The o-quinone-protein complexes, formed as a consequence of cell damage, may reduce the nutritional value of the tissue and thereby reduce predation but can also participate in the formation of structural barriers against invading pathogens. However, since a sufficient level of compartmentation-based regulation could be accomplished if PPO was targeted to the cytosol, the benefit derived by some plant species in having PPO present in the chloroplast lumen remains an intriguing question. So is there more to the chloroplastic location of PPO? An interaction between PPO activity and photosynthesis has been proposed on more than one occasion but, to date, evidence either for or against direct involvement has been equivocal, and the lack of identified chloroplastic substrates remains an issue. Similarly, PPO has been suggested to have both pro- and anti-oxidant functions. Nevertheless, several independent lines of evidence suggest that PPO responds to environmental conditions and could be involved in the response of plants to abiotic stress. This review highlights our current understanding of the in vivo functions of PPO and considers the potential opportunities it presents for exploitation to increase stress tolerance in food crops. |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
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4552 |
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Author |
Kunert, K.J.; van Wyk, S.G.; Cullis, C.A.; Vorster, B.J.; Foyer, C.H. |
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Title |
Potential use of phytocystatins in crop improvement, with a particular focus on legumes |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3559-3570 |
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Keywords |
Crops, Agricultural/*growth & development/metabolism; Cystatins/*metabolism; Cysteine Proteases/metabolism; Fabaceae/*growth & development/metabolism; Plant Proteins/*metabolism; Plant Root Nodulation; Stress, Physiological; Chilling; cystatin; drought; protein degradation; senescence; soybean; stress tolerance |
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Phytocystatins are a well-characterized class of naturally occurring protease inhibitors that function by preventing the catalysis of papain-like cysteine proteases. The action of cystatins in biotic stress resistance has been studied intensively, but relatively little is known about their functions in plant growth and defence responses to abiotic stresses, such as drought. Extreme weather events, such as drought and flooding, will have negative impacts on the yields of crop plants, particularly grain legumes. The concepts that changes in cellular protein content and composition are required for acclimation to different abiotic stresses, and that these adjustments are achieved through regulation of proteolysis, are widely accepted. However, the nature and regulation of the protein turnover machinery that underpins essential stress-induced cellular restructuring remain poorly characterized. Cysteine proteases are intrinsic to the genetic programmes that underpin plant development and senescence, but their functions in stress-induced senescence are not well defined. Transgenic plants including soybean that have been engineered to constitutively express phytocystatins show enhanced tolerance to a range of different abiotic stresses including drought, suggesting that manipulation of cysteine protease activities by altered phytocystatin expression in crop plants might be used to improve resilience and quality in the face of climate change. |
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0022-0957 1460-2431 |
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MA @ admin @ |
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4564 |
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Author |
Ventrella, D.; Charfeddine, M.; Giglio, L.; Castellini, M. |
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Title |
Application of DSSAT models for an agronomic adaptation strategy under climate change in Southern of Italy: optimum sowing and transplanting time for winter durum wheat and tomato |
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Journal Article |
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Year |
2012 |
Publication |
Italian Journal of Agronomy |
Abbreviated Journal |
Ital. J. Agron. |
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7 |
Issue |
1 |
Pages |
16 |
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Keywords |
DSSAT model; climate change; winter durum wheat; tomato; sowing time; transplanting time |
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Abstract |
Many climate change studies have been carried out in different parts of the world to assess climate change vulnerability and adaptation capacity of agricultural crops for certain environments characterized from climatic, pedological and agronomical point of view. The objective of this study was to analyse the productive response of winter durum wheat and tomato to climate change and sowing/transplanting time in one of the most productive areas of Italy (i.e. Capitanata, Puglia), using CERES-Wheat and CROPGRO cropping system models. Three climatic datasets were used: i) a single dataset (50 km x 50 km) provided by the JRC European centre for the period 1975- 2005; two datasets from HadCM3 for the IPCC A2 GHG scenario for time slices with +2°C (centred over 2030-2060) and +5°C (centred over 2070-2099), respectively. All three datasets were used to generate synthetic climate series using a weather simulator (model LARS-WG). No negative yield effects of climate change were observed for winter durum wheat with delayed sowing (from 330 to 345 DOY) increasing the average dry matter grain yield under forecasted scenarios. Instead, the warmer temperatures were primarily shown to accelerate the phenology, resulting in decreased yield for tomato under the + 5°C future climate scenario. In general, under global temperature increase by 5°C, early transplanting times could minimize the negative impact of climate change on crop productivity but the intensity of this effect was not sufficient to restore the current production levels of tomato cultivated in southern Italy. |
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2016-10-31 |
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2039-6805 1125-4718 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4821 |
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