Abstract: This study presents a Bayesian approach for the parameters’ identification of the STICS crop model based on the recently developed Differential Evolution Adaptive Metropolis (DREAM) algorithm. The posterior distributions of nine specific crop parameters of the STICS model were sampled with the aim to improve the growth simulations of a winter wheat (Triticum aestivum L) culture. The results obtained with the DREAM algorithm were initially compared to those obtained with a Nelder-Mead Simplex algorithm embedded within the OptimiSTICS package. Then, three types of likelihood functions implemented within the DREAM algorithm were compared, namely the standard least square, the weighted least square, and a transformed likelihood function that makes explicit use of the coefficient of variation (CV). The results showed that the proposed CV likelihood function allowed taking into account both noise on measurements and heteroscedasticity which are regularly encountered in crop modelling. (C) 2013 Elsevier Ltd. All rights reserved.

Abstract: This paper summarizes currently available data on greenhouse gas (GHG) emissions from African natural ecosystems and agricultural lands. The available data are used to synthesize current understanding of the drivers of change in GHG emissions, outline the knowledge gaps, and suggest future directions and strategies for GHG emission research. GHG emission data were collected from 75 studies conducted in 22 countries (n = 244) in sub-Saharan Africa (SSA). Carbon dioxide (CO2) emissions were by far the largest contributor to GHG emissions and global warming potential (GWP) in SSA natural terrestrial systems. CO2 emissions ranged from 3.3 to 57.0 Mg CO2 ha(-1) yr(-1), methane (CH4) emissions ranged from -4.8 to 3.5 kg ha(-1) yr(-1) (-0.16 to 0.12 Mg CO2 equivalent (eq.) ha(-1) yr(-1)), and nitrous oxide (N2O) emissions ranged from -0.1 to 13.7 kg ha(-1) yr(-1) (-0.03 to 4.1 Mg CO2 eq. ha(-1) yr(-1)). Soil physical and chemical properties, rewetting, vegetation type, forest management, and land-use changes were all found to be important factors affecting soil GHG emissions from natural terrestrial systems. In aquatic systems, CO2 was the largest contributor to total GHG emissions, ranging from 5.7 to 232.0 Mg CO2 ha(-1) yr(-1), followed by -26.3 to 2741.9 kgCH(4) ha(-1) yr(-1) (-0.89 to 93.2 Mg CO2 eq. ha(-1) yr(-1)) and 0.2 to 3.5 kg N2O ha(-1) yr(-1) (0.06 to 1.0 Mg CO2 eq. ha(-1) yr(-1)). Rates of all GHG emissions from aquatic systems were affected by type, location, hydrological characteristics, and water quality. In croplands, soil GHG emissions were also dominated by CO2, ranging from 1.7 to 141.2 Mg CO2 ha(-1) yr(-1), with -1.3 to 66.7 kgCH(4) ha(-1) yr(-1) (-0.04 to 2.3 Mg CO2 eq. ha(-1) yr(-1)) and 0.05 to 112.0 kg N2O ha(-1) yr(-1) (0.015 to 33.4 Mg CO2 eq. ha(-1) yr(-1)). N2O emission factors (EFs) ranged from 0.01 to 4.1 %. Incorporation of crop residues or manure with inorganic fertilizers invariably resulted in significant changes in GHG emissions, but results were inconsistent as the magnitude and direction of changes were differed by gas. Soil GHG emissions from vegetable gardens ranged from 73.3 to 132.0 Mg CO2 ha(-1) yr(-1) and 53.4 to 177.6 kg N2O ha(-1) yr(-1) (15.9 to 52.9 Mg CO2 eq. ha(-1) yr(-1)) and N2O EFs ranged from 3 to 4 %. Soil CO2 and N2O emissions from agroforestry were 38.6 Mg CO2 ha(-1) yr(-1) and 0.2 to 26.7 kg N2O ha(-1) yr(-1) (0.06 to 8.0 Mg CO2 eq. ha(-1) yr(-1)), respectively. Improving fallow with nitrogen (N)-fixing trees led to increased CO2 and N2O emissions compared to conventional croplands. The type and quality of plant residue in the fallow is an important control on how CO2 and N2O emissions are affected. Throughout agricultural lands, N2O emissions slowly increased with N inputs below 150 kg N ha(-1) yr(-1) and increased exponentially with N application rates up to 300 kg N ha(-1) yr(-1). The lowest yield-scaled N2O emissions were reported with N application rates ranging between 100 and 150 kg N ha(-1). Overall, total CO2 eq. emissions from SSA natural ecosystems and agricultural lands were 56.9 +/- 12.7 x 10(9) Mg CO2 eq. yr(-1) with natural ecosystems and agricultural lands contributing 76.3 and 23.7 %, respectively. Additional GHG emission measurements are urgently required to reduce uncertainty on annual GHG emissions from the different land uses and identify major control factors and mitigation options for low-emission development. A common strategy for addressing this data gap may include identifying priorities for data acquisition, utilizing appropriate technologies, and involving international networks and collaboration.

Abstract: This paper deals with the problem of predicting biomass and grain protein content using improved particle filtering (IPF) based on minimizing the Kullback-Leibler divergence. The performances of IPF are compared with those of the conventional particle filtering (PF) in two comparative studies. In the first one, we apply IPF and PF at a simple dynamic crop model with the aim to predict a single state variable, namely the winter wheat biomass, and to estimate several model parameters. In the second study, the proposed IPF and the PF are applied to a complex crop model (AZODYN) to predict a winter-wheat quality criterion, namely the grain protein content. The results of both comparative studies reveal that the IPF method provides a better estimation accuracy than the PF method. The benefit of the IPF method lies in its ability to provide accuracy related advantages over the PF method since, unlike the PF which depends on the choice of the sampling distribution used to estimate the posterior distribution, the IPF yields an optimum choice of this sampling distribution, which also utilizes the observed data. The performance of the proposed method is evaluated in terms of estimation accuracy, root mean square error, mean absolute error and execution times.