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Ben Touhami, H., & Bellocchi, G. (2015). Bayesian calibration of the Pasture Simulation model (PaSim) to simulate European grasslands under water stress. Ecological Informatics, 30, 356–364.
Abstract: As modeling becomes a more widespread practice in the agro-environmental sciences, scientists need reliable tools to calibrate models against ever more complex and detailed data. We present a generic Bayesian computation framework for grassland simulation, which enables parameter estimation in the Bayesian formalism by using Monte Carlo approaches. We outline the underlying rationale, discuss the computational issues, and provide results from an application of the Pasture Simulation model (PaSim) to three European grasslands. The framework was suited to investigate the challenging problem of calibrating complex biophysical models to data from altered scenarios generated by precipitation reduction (water stress conditions). It was used to infer the parameters of manipulated grassland systems and to assess the gain in uncertainty reduction by updating parameter distributions using measurements of the output variables.
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Ruane, A. C., Hudson, N. I., Asseng, S., Camarrano, D., Ewert, F., Martre, P., et al. (2016). Multi-wheat-model ensemble responses to interannual climate variability. Env. Model. Softw., 81, 86–101.
Abstract: We compare 27 wheat models’ yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981-2010 grain yield, and we evaluate results against the interannual variability of growing season temperature, precipitation, and solar radiation. The amount of information used for calibration has only a minor effect on most models’ climate response, and even small multi-model ensembles prove beneficial. Wheat model clusters reveal common characteristics of yield response to climate; however models rarely share the same cluster at all four sites indicating substantial independence. Only a weak relationship (R-2 <= 0.24) was found between the models’ sensitivities to interannual temperature variability and their response to long-term warming, suggesting that additional processes differentiate climate change impacts from observed climate variability analogs and motivating continuing analysis and model development efforts. Published by Elsevier Ltd.
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Wallach, D., Thorburn, P., Asseng, S., Challinor, A. J., Ewert, F., Jones, J. W., et al. (2016). Estimating model prediction error: Should you treat predictions as fixed or random. Env. Model. Softw., 84, 529–539.
Abstract: Crop models are important tools for impact assessment of climate change, as well as for exploring management options under current climate. It is essential to evaluate the uncertainty associated with predictions of these models. We compare two criteria of prediction error; MSEPfixed, which evaluates mean squared error of prediction for a model with fixed structure, parameters and inputs, and MSEPuncertain(X), which evaluates mean squared error averaged over the distributions of model structure, inputs and parameters. Comparison of model outputs with data can be used to estimate the former. The latter has a squared bias term, which can be estimated using hindcasts, and a model variance term, which can be estimated from a simulation experiment. The separate contributions to MSEPuncertain(X) can be estimated using a random effects ANOVA. It is argued that MSEPuncertain(X) is the more informative uncertainty criterion, because it is specific to each prediction situation.
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Dumont, B., Basso, B., Bodson, B., Destain, J. - P., & Destain, M. - F. (2016). Assessing and modeling economic and environmental impact of wheat nitrogen management in Belgium. Env. Model. Softw., 79, 184–196.
Abstract: Future progress in wheat yield will rely on identifying genotypes & management practices better adapted to the fluctuating environment Nitrogen (N) fertilization is probably the most important practice impacting crop growth. However, the adverse environmental impacts of inappropriate N management (e.g., lixiviation) must be considered in the decision-making process. A formal decisional algorithm was developed to tactically optimize the economic & environmental N fertilization in wheat. Climatic uncertainty analysis was performed using stochastic weather time-series (LARS-WG). Crop growth was simulated using STICS model. Experiments were conducted to support the algorithm recommendations: winter wheat was sown between 2008 & 2014 in a classic loamy soil of the Hesbaye Region, Belgium (temperate climate). Results indicated that, most of the time, the third N fertilization applied at flag-leaf stage by farmers could be reduced. Environmental decision criterion is most of the time the limiting factor in comparison to the revenues expected by farmers. (C) 2016 Elsevier Ltd. All rights reserved.
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Webber, H., Ewert, F., Kimball, B. A., Siebert, S., White, J. W., Wall, G. W., et al. (2016). Simulating canopy temperature for modelling heat stress in cereals. Env. Model. Softw., 77, 143–155.
Abstract: Crop models must be improved to account for the effects of heat stress events on crop yields. To date, most approaches in crop models use air temperature to define heat stress intensity as the cumulative sum of thermal times (TT) above a high temperature threshold during a sensitive period for yield formation. However, observational evidence indicates that crop canopy temperature better explains yield reductions associated with high temperature events than air temperature does. This study presents a canopy level energy balance using Monin ObukhovSimilarity Theory (MOST) with simplifications about the canopy resistance that render it suitable for application in crop models and other models of the plant environment. The model is evaluated for a uniform irrigated wheat canopy in Arizona and rainfed maize in Burkina Faso. No single variable regression relationships for key explanatory variables were found that were consistent across sowing dates to explain the deviation of canopy temperature from air temperature. Finally, thermal times determined with simulated canopy temperatures were able to reproduce thermal times calculated with observed canopy temperature, whereas those determined with air temperatures were not. (C) 2015 Elsevier Ltd. All rights reserved.
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