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Wallach, D., Nissanka, S. P., Karunaratne, A. S., Weerakoon, W. M. W., Thorburn, P. J., Boote, K. J., et al. (2016). Accounting for both parameter and model structure uncertainty in crop model predictions of phenology: A case study on rice. European Journal of Agronomy, .
Abstract: We consider predictions of the impact of climate warming on rice development times in Sri Lanka. The major emphasis is on the uncertainty of the predictions, and in particular on the estimation of mean squared error of prediction. Three contributions to mean squared error are considered. The first is parameter uncertainty that results from model calibration. To take proper account of the complex data structure, generalized least squares is used to estimate the parameters and the variance-covariance matrix of the parameter estimators. The second contribution is model structure uncertainty, which we estimate using two different models. An ANOVA analysis is used to separate the contributions of parameter and model uncertainty to mean squared error. The third contribution is model error, which is estimated using hindcasts. Mean squared error of prediction of time from emergence to maturity, for baseline +2 °C, is estimated as 108 days2, with model error contributing 86 days2, followed by model structure uncertainty which contributes 15 days2 and parameter uncertainty which contributes 7 days2. We also show how prediction uncertainty is reduced if prediction concerns development time averaged over years, or the difference in development time between baseline and warmer temperatures.
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Maiorano, A., Martre, P., Asseng, S., Ewert, F., Müller, C., Rötter, R. P., et al. (2016). Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research, 202, 5–20.
Abstract: To improve climate change impact estimates and to quantify their uncertainty, multi-model ensembles (MMEs) have been suggested. Model improvements can improve the accuracy of simulations and reduce the uncertainty of climate change impact assessments. Furthermore, they can reduce the number of models needed in a MME. Herein, 15 wheat growth models of a larger MME were improved through re-parameterization and/or incorporating or modifying heat stress effects on phenology, leaf growth and senescence, biomass growth, and grain number and size using detailed field experimental data from the USDA Hot Serial Cereal experiment (calibration data set). Simulation results from before and after model improvement were then evaluated with independent field experiments from a CIMMYT world-wide field trial network (evaluation data set). Model improvements decreased the variation (10th to 90th model ensemble percentile range) of grain yields simulated by the MME on average by 39% in the calibration data set and by 26% in the independent evaluation data set for crops grown in mean seasonal temperatures >24 °C. MME mean squared error in simulating grain yield decreased by 37%. A reduction in MME uncertainty range by 27% increased MME prediction skills by 47%. Results suggest that the mean level of variation observed in field experiments and used as a benchmark can be reached with half the number of models in the MME. Improving crop models is therefore important to increase the certainty of model-based impact assessments and allow more practical, i.e. smaller MMEs to be used effectively.
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Yin, X., Kersebaum, K. - C., Beaudoin, N., Constantin, J., Chen, F., Louarn, G., et al. (2020). Uncertainties in simulating N uptake, net N mineralization, soil mineral N and N leaching in European crop rotations using process-based models. Field Crops Research, , 107863.
Abstract: Modelling N transformations within cropping systems is crucial for N management optimization in order to increase N use efficiency and reduce N losses. Such modelling remains challenging because of the complexity of N cycling in soil–plant systems. In the current study, the uncertainties of six widely used process-based models (PBMs), including APSIM, CROPSYST, DAISY, FASSET, HERMES and STICS, were tested in simulating different N managements (catch crops (CC) and different N fertilizer rates) in 12-year rotations in Western Europe. Winter wheat, sugar beet and pea were the main crops, and radish was the main CC in the tested systems. Our results showed that PBMs simulated yield, aboveground biomass, N export and N uptake well with low RMSE values, except for sugar beet, which was generally less well parameterized. Moreover, PBMs provided more accurate crop simulations (i.e. N export and N uptake) compared to simulations of soil (N mineralization and soil mineral N (SMN)) and environmental variables (N leaching). The use of multi-model ensemble mean or median of four PBMs significantly reduced the mean absolute percentage error (MAPE) between simulations and observations to less than 15% for yield, aboveground biomass, N export and N uptake. Multi-model ensemble also significantly reduced the MAPE for net N mineralization and annual N leaching to around 15%, while it was larger than 20% for SMN. Generally, PBMs well simulated the CC effects on N fluxes, i.e. increasing N mineralization and reducing N leaching in both short-term and long-term, and all PBMs correctly predicted the effects of the reduced N rate on all measured variables in the study. The uncertainties of multi-model ensemble for N mineralization, SMN and N leaching were larger, mainly because these variables are influenced by plant-soil interactions and subject to cumulative long-term effects in crop rotations, which makes them more difficult to simulate. Large differences existed between individual PBMs due to the differences in formalisms for describing N processes in soil–plant systems, the skills of modelers and the model calibration level. In addition, the model performance also depended on the simulated variables, for instance, HERMES and FASSET performed better for yield and crop biomass, APSIM, DAISY and STICS performed better for N export and N uptake, STICS provided best simulation for SMN and N leaching among the six individual PBMs in the study, but all PBMs met difficulties to well predict either average or variance of soil N mineralization. Our results showed that better calibration for soil N variables is needed to improve model predictions of N cycling in order to optimize N management in crop rotations.
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Tomozeiu, R., Pasqui, M., & Quaresima, S. (2017). Future changes of air temperature over Italian agricultural areas: a statistical downscaling technique applied to 2021–2050 and 2071–2100 periods. Meteorology and Atmospheric Physics, in press.
Abstract: Climate change scenarios of seasonal minimum and maximum temperature over different Italian agricultural areas, during the periods 2021–2050 and 2071–2100 against 1961–1990, are assessed. The areas are those selected in the framework of the Agroscenari project and are represented by: Padano–Veneta plain, Marche, Beneventano, Destra Sele, Oristano, Puglia and Sicilia, all areas of prominent agricultural vocation with excellence productions. A statistical downscaling technique applied to ENSEMBLES global climate simulations, emission scenario A1B, is used to achieve this objective. The statistical scheme consists of a multivariate regression based on Canonical Correlation Analysis. The scheme is constructed using large-scale fields derived from ECMWF reanalysis and seasonal mean minimum, maximum temperature derived from national observed daily gridded data that cover 1959–2008 period. Once the most skillful model has been selected for each season and variable, this is then applied to GCMs of ENSEMBLES runs. The statistical downscaling method developed reveals good skill over the case studies of the present work, underlying the possibility to apply the scheme over whole Italian peninsula. In addition, the results emphasize that the temperature at 850 hPa is the best predictor for surface air temperature. The future projections show that an increase could be expected to occur under A1B scenario conditions in all seasons, both in minimum and maximum temperatures. The projected increases are about 2 °C during 2021–2050 and between 2.5 and 4.5 °C during 2071–2100, respect to 1961–1990. The spatial distribution of warming is projected to be quite uniform over the territory to the end of the century, while some spatial differences are noted over 2021–2050 period. For example, the increase in minimum temperature is projected to be slightly higher in areas from northern and central part than those situated in the southern part of Italian peninsula, during 2021–2050 period. The peak of changes is projected to appear during summer season, for both minimum and maximum temperature. The probability density function tends to shift to warmer values during both periods, with increases more intense during summer and to the end of the century, when the lower tail is projected to shift up to 3 °C and the upper tail up to 6 °C. All these projected changes have important impacts on viticulture, intensive fruit and tomatoes, some of the main agricultural systems analyzed in the Agroscenari project.
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