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Author |
Heinemann, A.B.; Barrios-Perez, C.; Ramirez-Villegas, J.; Arango-Londoño, D.; Bonilla-Findji, O.; Medeiros, J.C.; Jarvis, A. |
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Title |
Variation and impact of drought-stress patterns across upland rice target population of environments in Brazil |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal  |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3625-3638 |
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Keywords |
Brazil; Climate; Computer Simulation; Crops, Agricultural/physiology; *Droughts; *Environment; Geography; Oryza/*physiology; Plant Transpiration; *Stress, Physiological; Water; Breeding; Oryza sativa; environment classification; modelling; water deficit. |
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Abstract |
The upland rice (UR) cropped area in Brazil has decreased in the last decade. Importantly, a portion of this decrease can be attributed to the current UR breeding programme strategy, according to which direct grain yield selection is targeted primarily to the most favourable areas. New strategies for more-efficient crop breeding under non-optimal conditions are needed for Brazil’s UR regions. Such strategies should include a classification of spatio-temporal yield variations in environmental groups, as well as a determination of prevalent drought types and their characteristics (duration, intensity, phenological timing, and physiological effects) within those environmental groups. This study used a process-based crop model to support the Brazilian UR breeding programme in their efforts to adopt a new strategy that accounts for the varying range of environments where UR is currently cultivated. Crop simulations based on a commonly grown cultivar (BRS Primavera) and statistical analyses of simulated yield suggested that the target population of environments can be divided into three groups of environments: a highly favorable environment (HFE, 19% of area), a favorable environment (FE, 44%), and least favourable environment (LFE, 37%). Stress-free conditions dominated the HFE group (69% likelihood) and reproductive stress dominated the LFE group (68% likelihood), whereas reproductive and terminal drought stress were found to be almost equally likely to occur in the FE group. For the best and worst environments, we propose specific adaptation focused on the representative stress, while for the FE, wide adaptation to drought is suggested. ‘Weighted selection’ is also a possible strategy for the FE and LFE environment groups. |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
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4560 |
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Author |
Dockter, C.; Hansson, M. |
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Title |
Improving barley culm robustness for secured crop yield in a changing climate |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3499-3509 |
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Keywords |
Climate Change; Crops, Agricultural/*anatomy & histology/genetics/*growth & development; Edible Grain/anatomy & histology/genetics/growth & development; Genes, Plant; Hordeum/*anatomy & histology/genetics/*growth & development; Phenotype; Barley (Hordeum vulgare); Green Revolution; brassinosteroid; gibberellin; lodging; plant architecture; short culm |
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Abstract |
The Green Revolution combined advancements in breeding and agricultural practice, and provided food security to millions of people. Daily food supply is still a major issue in many parts of the world and is further challenged by future climate change. Fortunately, life science research is currently making huge progress, and the development of future crop plants will be explored. Today, plant breeding typically follows one gene per trait. However, new scientific achievements have revealed that many of these traits depend on different genes and complex interactions of proteins reacting to various external stimuli. These findings open up new possibilities for breeding where variations in several genes can be combined to enhance productivity and quality. In this review we present an overview of genes determining plant architecture in barley, with a special focus on culm length. Many genes are currently known only through their mutant phenotypes, but emerging genomic sequence information will accelerate their identification. More than 1000 different short-culm barley mutants have been isolated and classified in different phenotypic groups according to culm length and additional pleiotropic characters. Some mutants have been connected to deficiencies in biosynthesis and reception of brassinosteroids and gibberellic acids. Still other mutants are unlikely to be connected to these hormones. The genes and corresponding mutations are of potential interest for development of stiff-straw crop plants tolerant to lodging, which occurs in extreme weather conditions with strong winds and heavy precipitation. |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
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4556 |
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Author |
Baker, A.; Ceasar, S.A.; Palmer, A.J.; Paterson, J.B.; Qi, W.; Muench, S.P.; Baldwin, S.A. |
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Title |
Replace, reuse, recycle: improving the sustainable use of phosphorus by plants |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3523-3540 |
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Keywords |
Conservation of Natural Resources; Crops, Agricultural/growth & development/metabolism; Gene Expression Regulation, Plant; Phosphorus/*metabolism; Plant Proteins/genetics/metabolism; Plants/genetics/*metabolism; Fertilizers; membrane transporters; nutrient recycling; phosphate; phosphate signalling; transcription factors |
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The ‘phosphorus problem’ has recently received strong interest with two distinct strands of importance. The first is that too much phosphorus (P) is entering into waste water, creating a significant economic and ecological problem. Secondly, while agricultural demand for phosphate fertilizer is increasing to maintain crop yields, rock phosphate reserves are rapidly declining. Unravelling the mechanisms by which plants sense, respond to, and acquire phosphate can address both problems, allowing the development of crop plants that are more efficient at acquiring and using limited amounts of phosphate while at the same time improving the potential of plants and other photosynthetic organisms for nutrient recapture and recycling from waste water. In this review, we attempt to synthesize these important but often disparate parts of the debate in a holistic fashion, since solutions to such a complex problem require integrated and multidisciplinary approaches that address both P supply and demand. Rapid progress has been made recently in our understanding of local and systemic signalling mechanisms for phosphate, and of expression and regulation of membrane proteins that take phosphate up from the environment and transport it within the plant. We discuss the current state of understanding of such mechanisms involved in sensing and responding to phosphate stress. We also discuss approaches to improve the P-use efficiency of crop plants and future direction for sustainable use of P, including use of photosynthetic organisms for recapture of P from waste waters. |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
Serial |
4548 |
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Author |
De Swaef, T.; Bellocchi, G.; Aper, J.; Lootens, P.; Roldan-Ruiz, I. |
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Title |
Use of identifiability analysis in designing phenotyping experiments for modelling forage production and quality |
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Journal Article |
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Year |
2019 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
70 |
Issue |
9 |
Pages |
2587-2604 |
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Keywords |
Breeding; grassland modelling; identifiability analysis; perennial; ryegrass; phenotyping; sensitivity analysis; pasture simulation-model; practical identifiability; crop; water; parameters; systems; carbon; uncertainty; sensitivity; emissions |
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Abstract |
Agricultural systems models are complex and tend to be over-parameterized with respect to observational datasets. Practical identifiability analysis based on local sensitivity analysis has proved effective in investigating identifiable parameter sets in environmental models, but has not been applied to agricultural systems models. Here, we demonstrate that identifiability analysis improves experimental design to ensure independent parameter estimation for yield and quality outputs of a complex grassland model. The Pasture Simulation model (PaSim) was used to demonstrate the effectiveness of practical identifiability analysis in designing experiments and measurement protocols within phe-notyping experiments with perennial ryegrass. Virtual experiments were designed combining three factors: frequency of measurements, duration of the experiment. and location of trials. Our results demonstrate that (i) PaSim provides sufficient detail in terms of simulating biomass yield and quality of perennial ryegrass for use in breeding, (ii) typical breeding trials are insufficient to parameterize all influential parameters, (iii) the frequency of measurements is more important than the number of growing seasons to improve the identifiability of PaSim parameters, and (iv) identifiability analysis provides a sound approach for optimizing the design of multi-location trials. Practical identifiability analysis can play an important role in ensuring proper exploitation of phenotypic data and cost-effective multi-location experimental designs. Considering the growing importance of simulation models, this study supports the design of experiments and measurement protocols in the phenotyping networks that have recently been organized. |
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2020-02-14 |
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0022-0957 |
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LiveM, ft_macsur |
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MA @ admin @ |
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5231 |
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Author |
Semenov, M.A.; Stratonovitch, P.; Alghabari, F.; Gooding, M.J. |
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Title |
Adapting wheat in Europe for climate change |
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Journal Article |
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Year |
2014 |
Publication |
Journal of Cereal Science |
Abbreviated Journal |
J. Ceareal Sci. |
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59 |
Issue |
3 |
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245-256 |
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Keywords |
A, maximum area of flag leaf area; ABA, abscisic acid; CV, coefficient of variation; Crop improvement; Crop modelling; FC, field capacity; GMT, Greenwich mean time; GS, growth stage; Gf, grain filling duration; HI, harvest index; HSP, heat shock protein; Heat and drought tolerance; Impact assessment; LAI, leaf area index; Ph, phylochron; Pp, photoperiod response; Ru, root water uptake; S, duration of leaf senescence; SF, drought stress factor; Sirius; Wheat ideotype |
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Abstract |
Increasing cereal yield is needed to meet the projected increased demand for world food supply of about 70% by 2050. Sirius, a process-based model for wheat, was used to estimate yield potential for wheat ideotypes optimized for future climatic projections for ten wheat growing areas of Europe. It was predicted that the detrimental effect of drought stress on yield would be decreased due to enhanced tailoring of phenology to future weather patterns, and due to genetic improvements in the response of photosynthesis and green leaf duration to water shortage. Yield advances could be made through extending maturation and thereby improve resource capture and partitioning. However the model predicted an increase in frequency of heat stress at meiosis and anthesis. Controlled environment experiments quantify the effects of heat and drought at booting and flowering on grain numbers and potential grain size. A current adaptation of wheat to areas of Europe with hotter and drier summers is a quicker maturation which helps to escape from excessive stress, but results in lower yields. To increase yield potential and to respond to climate change, increased tolerance to heat and drought stress should remain priorities for the genetic improvement of wheat. |
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0733-5210 |
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CropM, ft_macsur |
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MA @ admin @ |
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4543 |
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