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Author |
De Swaef, T.; Bellocchi, G.; Aper, J.; Lootens, P.; Roldan-Ruiz, I. |
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Title |
Use of identifiability analysis in designing phenotyping experiments for modelling forage production and quality |
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Journal Article |
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Year |
2019 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal  |
J. Experim. Bot. |
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Volume |
70 |
Issue |
9 |
Pages |
2587-2604 |
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Keywords |
Breeding; grassland modelling; identifiability analysis; perennial; ryegrass; phenotyping; sensitivity analysis; pasture simulation-model; practical identifiability; crop; water; parameters; systems; carbon; uncertainty; sensitivity; emissions |
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Abstract |
Agricultural systems models are complex and tend to be over-parameterized with respect to observational datasets. Practical identifiability analysis based on local sensitivity analysis has proved effective in investigating identifiable parameter sets in environmental models, but has not been applied to agricultural systems models. Here, we demonstrate that identifiability analysis improves experimental design to ensure independent parameter estimation for yield and quality outputs of a complex grassland model. The Pasture Simulation model (PaSim) was used to demonstrate the effectiveness of practical identifiability analysis in designing experiments and measurement protocols within phe-notyping experiments with perennial ryegrass. Virtual experiments were designed combining three factors: frequency of measurements, duration of the experiment. and location of trials. Our results demonstrate that (i) PaSim provides sufficient detail in terms of simulating biomass yield and quality of perennial ryegrass for use in breeding, (ii) typical breeding trials are insufficient to parameterize all influential parameters, (iii) the frequency of measurements is more important than the number of growing seasons to improve the identifiability of PaSim parameters, and (iv) identifiability analysis provides a sound approach for optimizing the design of multi-location trials. Practical identifiability analysis can play an important role in ensuring proper exploitation of phenotypic data and cost-effective multi-location experimental designs. Considering the growing importance of simulation models, this study supports the design of experiments and measurement protocols in the phenotyping networks that have recently been organized. |
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2020-02-14 |
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English |
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0022-0957 |
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LiveM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5231 |
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Author |
Nguyen, T.P.L.; Seddaiu, G.; Roggero, P.P. |
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Title |
Declarative or procedural knowledge? Knowledge for enhancing farmers’ mitigation and adaptation behaviour to climate change |
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Journal Article |
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Year |
2019 |
Publication |
Journal of Rural Studies |
Abbreviated Journal |
Journal of Rural Studies |
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Volume |
67 |
Issue |
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Pages |
46-56 |
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Keywords |
Farming systems; Knowledge; Attitude; Practice; Social construction |
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Abstract |
Climate change poses a major challenge for farmers, but agricultural sustainability, mitigation, and adaptation can effectively decrease climate impacts on agricultural systems. Changes in farming practices are necessary to reduce emissions and to adapt to climate change. However, such modifications to common practices depend, to a large extent, on farmers’ knowledge and attitudes towards climate risks. An empirical study of farmers’ attitudes and knowledge of climate change mitigation and adaptation practices is useful to understand how farmers’ knowledge influences their attitudes and practices towards climate change mitigation and adaptation. Based on a case study characterised by four agricultural farming systems (extensive dairy sheep, intensive dairy cattle, horticultural farming, and rice farming) in the Province of Oristano in Italy, this study contains an investigation of (i) farmers’ knowledge of climate change causes and effects, how they construct such knowledge, and how they adapt to the phenomenon; (ii) what and how are farmers’ attitudes towards climate change causes are shaped under their contextual social interests and values; and (iii) if their practices in responding to climate variability are influenced by their constructed knowledge. The research results showed that farmers’ declarative knowledge of climate change did not affect their adaptation practices but directed farmers’ attitudes towards climate change causes. The findings also underscore the necessity of facilitating social learning spaces for enhancing virtuous behaviours towards climate change mitigation and the sharing and co-production of procedural knowledge for developing shared sustainable climate adaptation practices at the farm level. |
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2019-02-19 |
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0743-0167 |
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article |
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CropM, TradeM, ft_macsur |
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MA @ admin @ |
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5217 |
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Foyer, C.H.; Siddique, K.H.M.; Tai, A.P.K.; Anders, S.; Fodor, N.; Wong, F.-L.; Ludidi, N.; Chapman, M.A.; Ferguson, B.J.; Considine, M.J.; Zabel, F.; Prasad, P.V.V.; Varshney, R.K.; Nguyen, H.T.; Lam, H.-M. |
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Title |
Modelling predicts that soybean is poised to dominate crop production across Africa |
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Journal Article |
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Year |
2019 |
Publication |
Plant Cell and Environment |
Abbreviated Journal |
Plant Cell Environ. |
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Volume |
42 |
Issue |
1 |
Pages |
373-385 |
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Keywords |
Climate-Change; Food Security; Sustainable Intensification; Smallholder; Farmers; Nitrogen-Fixation; Yield; Adaptation; Diversity; Impact; CO2 |
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Abstract |
The superior agronomic and human nutritional properties of grain legumes (pulses) make them an ideal foundation for future sustainable agriculture. Legume-based farming is particularly important in Africa, where small-scale agricultural systems dominate the food production landscape. Legumes provide an inexpensive source of protein and nutrients to African households as well as natural fertilization for the soil. Although the consumption of traditionally grown legumes has started to decline, the production of soybeans (Glycine max Merr.) is spreading fast, especially across southern Africa. Predictions of future land-use allocation and production show that the soybean is poised to dominate future production across Africa. Land use models project an expansion of harvest area, whereas crop models project possible yield increases. Moreover, a seed change in farming strategy is underway. This is being driven largely by the combined cash crop value of products such as oils and the high nutritional benefits of soybean as an animal feed. Intensification of soybean production has the potential to reduce the dependence of Africa on soybean imports. However, a successful “soybean bonanza” across Africa necessitates an intensive research, development, extension, and policy agenda to ensure that soybean genetic improvements and production technology meet future demands for sustainable production. |
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2019-01-10 |
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English |
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ISSN |
0140-7791 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5215 |
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Author |
Özkan Gülzari, Ş.; Vosough Ahmadi, B.; Stott, A.W. |
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Title |
Impact of subclinical mastitis on greenhouse gas emissions intensity and profitability of dairy cows in Norway |
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Journal Article |
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Year |
2018 |
Publication |
Preventive Veterinary Medicine |
Abbreviated Journal |
Preventive Veterinary Medicine |
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Volume |
150 |
Issue |
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Pages |
19-29 |
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Keywords |
Dairy cow; Dynamic programming; Greenhouse gas emissions intensity; Profitability; Subclinical mastitis; Whole farm modelling |
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Abstract |
Impaired animal health causes both productivity and profitability losses on dairy farms, resulting in inefficient use of inputs and increase in greenhouse gas (GHG) emissions produced per unit of product (i.e. emissions intensity). Here, we used subclinical mastitis as an exemplar to benchmark alternative scenarios against an economic optimum and adjusted herd structure to estimate the GHG emissions intensity associated with varying levels of disease. Five levels of somatic cell count (SCC) classes were considered namely 50,000 (i.e. SCC50), 200,000, 400,000, 600,000 and 800,000 cells/mL (milliliter) of milk. The effects of varying levels of SCC on milk yield reduction and consequential milk price penalties were used in a dynamic programming (DP) model that maximizes the profit per cow, represented as expected net present value, by choosing optimal animal replacement rates. The GHG emissions intensities associated with different levels of SCC were then computed using a farm-scale model (HolosNor). The total culling rates of both primiparous (PP) and multiparous (MP) cows for the five levels of SCC scenarios estimated by the model varied from a minimum of 30.9% to a maximum of 43.7%. The expected profit was the highest for cows with SCC200 due to declining margin over feed, which influenced the DP model to cull and replace more animals and generate higher profit under this scenario compared to SCC50. The GHG emission intensities for the PP and MP cows with SCC50 were 1.01 kg (kilogram) and 0.95 kg carbon dioxide equivalents (CO2e) per kg fat and protein corrected milk (FPCM), respectively, with the lowest emissions being achieved in SCC50. Our results show that there is a potential to reduce the farm GHG emissions intensity by 3.7% if the milk production was improved through reducing the level of SCC to 50,000 cells/mL in relation to SCC level 800,000 cells/mL. It was concluded that preventing and/or controlling subclinical mastitis consequently reduces the GHG emissions per unit of product on farm that results in improved profits for the farmers through reductions in milk losses, optimum culling rate and reduced feed and other variable costs. We suggest that further studies exploring the impact of a combination of diseases on emissions intensity are warranted. |
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0167-5877 |
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LiveM, ft_macsur |
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MA @ admin @ |
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5181 |
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Author |
Kahiluoto, H.; Kaseva, J.; Balek, J.; Olesen, J.E.; Ruiz-Ramos, M.; Gobin, A.; Kersebaum, K.C.; Takac, J.; Ruget, F.; Ferrise, R.; Bezak, P.; Capellades, G.; Dibari, C.; Makinen, H.; Nendel, C.; Ventrella, D.; Rodriguez, A.; Bindi, M.; Trnka, M. |
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Title |
Decline in climate resilience of European wheat |
Type |
Journal Article |
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Year |
2019 |
Publication |
Proceedings of the National Academy of Sciences of the United States of America |
Abbreviated Journal |
Proc. Natl. Acad. Sci. U. S. A. |
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Volume |
116 |
Issue |
1 |
Pages |
123-128 |
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Keywords |
wheat; cultivar; Europe; climate resilience; response diversity; Diversity; Weather; Growth; Shifts; Crops; Yield; Variability |
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Abstract |
Food security relies on the resilience of staple food crops to climatic variability and extremes, but the climate resilience of European wheat is unknown. A diversity of responses to disturbance is considered a key determinant of resilience. The capacity of a sole crop genotype to perform well under climatic variability is limited; therefore, a set of cultivars with diverse responses to weather conditions critical to crop yield is required. Here, we show a decline in the response diversity of wheat in farmers’ fields in most European countries after 2002-2009 based on 101,000 cultivar yield observations. Similar responses to weather were identified in cultivar trials among central European countries and southern European countries. A response diversity hotspot appeared in the trials in Slovakia, while response diversity “deserts” were identified in Czechia and Germany and for durum wheat in southern Europe. Positive responses to abundant precipitation were lacking. This assessment suggests that current breeding programs and cultivar selection practices do not sufficiently prepare for climatic uncertainty and variability. Consequently, the demand for climate resilience of staple food crops such as wheat must be better articulated. Assessments and communication of response diversity enable collective learning across supply chains. Increased awareness could foster governance of resilience through research and breeding programs, incentives, and regulation. |
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2019-01-17 |
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English |
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ISSN |
0027-8424 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5226 |
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